Bacterial transcriptional regulators: A road map for functional, structural, and biophysical characterization
The different niches through which bacteria move during their life cycle require a fast
response to the many environmental queues they encounter. The sensing of these stimuli …
response to the many environmental queues they encounter. The sensing of these stimuli …
Transcriptional regulators a la carte: engineering new effector specificities in bacterial regulatory proteins
TC Galvão, V De Lorenzo - Current Opinion in Biotechnology, 2006 - Elsevier
For many regulators of bacterial biodegradation pathways, small molecule/effector binding is
the signal for triggering transcriptional activation. Thus, regulation results from a cross-talk …
the signal for triggering transcriptional activation. Thus, regulation results from a cross-talk …
Coordination logic of the sensing machinery in the transcriptional regulatory network of Escherichia coli
The active and inactive state of transcription factors in growing cells is usually directed by
allosteric physicochemical signals or metabolites, which are in turn either produced in the …
allosteric physicochemical signals or metabolites, which are in turn either produced in the …
Functional annotation of bacterial signal transduction systems: progress and challenges
D Martín-Mora, M Fernández, F Velando… - International journal of …, 2018 - mdpi.com
Bacteria possess a large number of signal transduction systems that sense and respond to
different environmental cues. Most frequently these are transcriptional regulators, two …
different environmental cues. Most frequently these are transcriptional regulators, two …
[PDF][PDF] Rethinking the bacterial genetic regulation
S Reverchon, P Sobetzko, W Nasser… - Biochemistry and …, 2015 - researchgate.net
Bacteria are the most ancient and abundant organisms on the earth. Whereas bacterial
organisms served as first cellular model systems for explorations of genetic control by …
organisms served as first cellular model systems for explorations of genetic control by …
A catalogue of signal molecules that interact with sensor kinases, chemoreceptors and transcriptional regulators
MA Matilla, F Velando, D Martín-Mora… - FEMS Microbiology …, 2022 - academic.oup.com
Bacteria have evolved many different signal transduction systems that sense signals and
generate a variety of responses. Generally, most abundant are transcriptional regulators …
generate a variety of responses. Generally, most abundant are transcriptional regulators …
Bioinformatics resources for the study of gene regulation in bacteria
Genomics, which has been identified as the science of the century, is dramatically changing
the historically weak relationship between experimental and theoretical biology. The …
the historically weak relationship between experimental and theoretical biology. The …
Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology
I Bervoets, D Charlier - FEMS microbiology reviews, 2019 - academic.oup.com
Gene expression occurs in two essential steps: transcription and translation. In bacteria, the
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …
Allostery and protein plasticity: the keystones for bacterial signaling and regulation
JA Imelio, F Trajtenberg, A Buschiazzo - Biophysical Reviews, 2021 - Springer
Bacteria sense intracellular and environmental signals using an array of proteins as
antennas. The information is transmitted from such sensory modules to other protein …
antennas. The information is transmitted from such sensory modules to other protein …
[HTML][HTML] Tuning transcriptional regulation through signaling: a predictive theory of allosteric induction
Allosteric regulation is found across all domains of life, yet we still lack simple, predictive
theories that directly link the experimentally tunable parameters of a system to its input …
theories that directly link the experimentally tunable parameters of a system to its input …