Predicting measures of soil health using the microbiome and supervised machine learning
Soil health encompasses a range of biological, chemical, and physical soil properties that
sustain the commercial and ecological value of agroecosystems. Monitoring soil health …
sustain the commercial and ecological value of agroecosystems. Monitoring soil health …
Ecological insights into soil health according to the genomic traits and environment-wide associations of bacteria in agricultural soils
Soil microbiomes are sensitive to current and previous soil conditions, and bacterial
'bioindicators' of biological, physical, and chemical soil properties have considerable …
'bioindicators' of biological, physical, and chemical soil properties have considerable …
How microbes can, and cannot, be used to assess soil health
Healthy soils are critical to the health of ecosystems, economies, and human populations.
Thus, it is widely acknowledged that soil health is important to quantify, both for assessment …
Thus, it is widely acknowledged that soil health is important to quantify, both for assessment …
Soil microbiome predictability increases with spatial and taxonomic scale
Soil microorganisms shape ecosystem function, yet it remains an open question whether we
can predict the composition of the soil microbiome in places before observing it …
can predict the composition of the soil microbiome in places before observing it …
Microbial community structure and diversity as indicators for evaluating soil quality
The living soil system is of primary importance in sustainable agricultural production. Soil
quality is considered as an integrative indicator of environmental quality, food security and …
quality is considered as an integrative indicator of environmental quality, food security and …
Using soil bacterial communities to predict physico-chemical variables and soil quality
Background Soil ecosystems consist of complex interactions between biological
communities and physico-chemical variables, all of which contribute to the overall quality of …
communities and physico-chemical variables, all of which contribute to the overall quality of …
Predicting disease occurrence with high accuracy based on soil macroecological patterns of Fusarium wilt
Soil-borne plant diseases are increasingly causing devastating losses in agricultural
production. The development of a more refined model for disease prediction can aid in …
production. The development of a more refined model for disease prediction can aid in …
You must choose, but choose wisely: Model-based approaches for microbial community analysis
MFA Leite, EE Kuramae - Soil Biology and Biochemistry, 2020 - Elsevier
Soil microbial community data produced by next-generation sequencing platforms has
introduced a new era in microbial ecology studies but poses a challenge for data analysis …
introduced a new era in microbial ecology studies but poses a challenge for data analysis …
Rigorous, empirical, and quantitative: a proposed pipeline for soil health assessments
Soil health is a promising lens through which to approach land management, having the
potential to serve as a descriptor of biophysical processes and as an effective …
potential to serve as a descriptor of biophysical processes and as an effective …
Beyond microbial diversity for predicting soil functions: A mini review
P Nannipieri, J Ascher-Jenull, MT Ceccherini… - Pedosphere, 2020 - Elsevier
Since the advent of sequencing technologies, the determination of microbial diversity to
predict microbial functions, which are the major determinants of soil functions, has become a …
predict microbial functions, which are the major determinants of soil functions, has become a …