[HTML][HTML] Deep learning-based prediction of molecular cancer biomarkers from tissue slides: A new tool for precision oncology

SH Lee, HJ Jang - Clinical and Molecular Hepatology, 2022 - ncbi.nlm.nih.gov
Molecular tests are necessary to stratify cancer patients for targeted therapy. However, high
cost and technical barriers limit the application of these tests, hindering optimal treatment …

Deep learning of histopathological features for the prediction of tumour molecular genetics

P Murchan, C Ó'Brien, S O'Connell, CS McNevin… - Diagnostics, 2021 - mdpi.com
Advanced diagnostics are enabling cancer treatments to become increasingly tailored to the
individual through developments in immunotherapies and targeted therapies. However, long …

A systematic pan-cancer study on deep learning-based prediction of multi-omic biomarkers from routine pathology images

S Arslan, J Schmidt, C Bass, D Mehrotra… - Communications …, 2024 - nature.com
Background The objective of this comprehensive pan-cancer study is to evaluate the
potential of deep learning (DL) for molecular profiling of multi-omic biomarkers directly from …

A systematic analysis of deep learning in genomics and histopathology for precision oncology

M Unger, JN Kather - BMC Medical Genomics, 2024 - Springer
Background Digitized histopathological tissue slides and genomics profiling data are
available for many patients with solid tumors. In the last 5 years, Deep Learning (DL) has …

Deep learning can predict multi-omic biomarkers from routine pathology images: A systematic large-scale study

S Arslan, D Mehrotra, J Schmidt, A Geraldes, S Singhal… - 2022 - europepmc.org
We assessed the pan-cancer predictability of multi-omic biomarkers from haematoxylin and
eosin (H&E)-stained whole slide images (WSI) using deep learning (DL) throughout a …

Deep learning in cancer genomics and histopathology

M Unger, JN Kather - Genome Medicine, 2024 - Springer
Histopathology and genomic profiling are cornerstones of precision oncology and are
routinely obtained for patients with cancer. Traditionally, histopathology slides are manually …

Deep learning in cancer pathology: a new generation of clinical biomarkers

A Echle, NT Rindtorff, TJ Brinker, T Luedde… - British journal of …, 2021 - nature.com
Clinical workflows in oncology rely on predictive and prognostic molecular biomarkers.
However, the growing number of these complex biomarkers tends to increase the cost and …

[HTML][HTML] Prediction of clinically actionable genetic alterations from colorectal cancer histopathology images using deep learning

HJ Jang, A Lee, J Kang, IH Song… - World Journal of …, 2020 - ncbi.nlm.nih.gov
BACKGROUND Identifying genetic mutations in cancer patients have been increasingly
important because distinctive mutational patterns can be very informative to determine the …

Regression-based Deep-Learning predicts molecular biomarkers from pathology slides

OSM El Nahhas, CML Loeffler, ZI Carrero… - nature …, 2024 - nature.com
Deep Learning (DL) can predict biomarkers from cancer histopathology. Several clinically
approved applications use this technology. Most approaches, however, predict categorical …

Deep learning in digital pathology for personalized treatment plans of cancer patients

Z Wen, S Wang, DM Yang, Y Xie, M Chen… - Seminars in diagnostic …, 2023 - Elsevier
Over the past decade, many new cancer treatments have been developed and made
available to patients. However, in most cases, these treatments only benefit a specific …