Integrating genetic and non-genetic determinants of cancer evolution by single-cell multi-omics
AS Nam, R Chaligne, DA Landau - Nature Reviews Genetics, 2021 - nature.com
Cancer represents an evolutionary process through which growing malignant populations
genetically diversify, leading to tumour progression, relapse and resistance to therapy. In …
genetically diversify, leading to tumour progression, relapse and resistance to therapy. In …
[HTML][HTML] Unraveling the complexity of the cancer microenvironment with multidimensional genomic and cytometric technologies
NL De Vries, A Mahfouz, F Koning… - Frontiers in …, 2020 - frontiersin.org
Cancers are characterized by extensive heterogeneity that occurs intratumorally, between
lesions, and across patients. To study cancer as a complex biological system …
lesions, and across patients. To study cancer as a complex biological system …
[HTML][HTML] Methods and applications for single-cell and spatial multi-omics
K Vandereyken, A Sifrim, B Thienpont… - Nature Reviews Genetics, 2023 - nature.com
The joint analysis of the genome, epigenome, transcriptome, proteome and/or metabolome
from single cells is transforming our understanding of cell biology in health and disease. In …
from single cells is transforming our understanding of cell biology in health and disease. In …
[HTML][HTML] The technological landscape and applications of single-cell multi-omics
Single-cell multi-omics technologies and methods characterize cell states and activities by
simultaneously integrating various single-modality omics methods that profile the …
simultaneously integrating various single-modality omics methods that profile the …
[HTML][HTML] Statistical single cell multi-omics integration
M Colomé-Tatché, FJ Theis - Current Opinion in Systems Biology, 2018 - Elsevier
Single cell high throughput genomic measurements are revolutionizing the fields of biology
and medicine, providing a means to tackle biological problems that have thus far been …
and medicine, providing a means to tackle biological problems that have thus far been …
Mapping genomic and epigenomic evolution in cancer ecosystems
Cancer is a major cause of global mortality underpinned by genomic and epigenomic
derangements. Here, we highlight the importance of multimodal data integration in …
derangements. Here, we highlight the importance of multimodal data integration in …
[HTML][HTML] Using single-cell multiple omics approaches to resolve tumor heterogeneity
It has become increasingly clear that both normal and cancer tissues are composed of
heterogeneous populations. Genetic variation can be attributed to the downstream effects of …
heterogeneous populations. Genetic variation can be attributed to the downstream effects of …
[HTML][HTML] Single cell multi-omics reveal intra-cell-line heterogeneity across human cancer cell lines
Q Zhu, X Zhao, Y Zhang, Y Li, S Liu, J Han… - Nature …, 2023 - nature.com
Human cancer cell lines have long served as tools for cancer research and drug discovery,
but the presence and the source of intra-cell-line heterogeneity remain elusive. Here, we …
but the presence and the source of intra-cell-line heterogeneity remain elusive. Here, we …
Single-cell (multi) omics technologies
L Chappell, AJC Russell, T Voet - Annual review of genomics …, 2018 - annualreviews.org
Single-cell multiomics technologies typically measure multiple types of molecule from the
same individual cell, enabling more profound biological insight than can be inferred by …
same individual cell, enabling more profound biological insight than can be inferred by …
Defining cell identity with single‐cell omics
L Mincarelli, A Lister, J Lipscombe, IC Macaulay - Proteomics, 2018 - Wiley Online Library
Cells are a fundamental unit of life, and the ability to study the phenotypes and behaviors of
individual cells is crucial to understanding the workings of complex biological systems. Cell …
individual cells is crucial to understanding the workings of complex biological systems. Cell …