Evolution and population genetics of exotic and re-emerging pathogens: novel tools and approaches

NJ Grünwald, EM Goss - Annual review of phytopathology, 2011 - annualreviews.org
Given human population growth and accelerated global trade, the rate of emergence of
exotic plant pathogens is bound to increase. Understanding the processes that lead to the …

Genome-enabled analysis of plant-pathogen migration

EM Goss - Annual review of phytopathology, 2015 - annualreviews.org
Trade in plant and plant products has profoundly affected the global distribution and
diversity of plant pathogens. Identification of migration pathways can be used to monitor or …

Germs, genomes and genealogies

DJ Wilson, D Falush, G McVean - Trends in Ecology & Evolution, 2005 - cell.com
Genetic diversity in pathogen species contains information about evolutionary and
epidemiological processes, including the origins and history of disease, the nature of the …

The structured coalescent and its approximations

NF Müller, DA Rasmussen… - Molecular biology and …, 2017 - academic.oup.com
Phylogeographic methods can help reveal the movement of genes between populations of
organisms. This has been widely done to quantify pathogen movement between different …

A population genomics perspective on the emergence and adaptation of new plant pathogens in agro-ecosystems

EH Stukenbrock, T Bataillon - 2012 - journals.plos.org
Plants and pathogens evolve in response to each other. This coevolutionary arms race is
fueled by genetic variation underlying the recognition of pathogen proteins by the host and …

Emerging concepts of data integration in pathogen phylodynamics

G Baele, MA Suchard, A Rambaut… - Systematic biology, 2017 - academic.oup.com
Phylodynamics has become an increasingly popular statistical framework to extract
evolutionary and epidemiological information from pathogen genomes. By harnessing such …

[HTML][HTML] The need for speed: compartmentalized genome evolution in filamentous phytopathogens

L Frantzeskakis, S Kusch, R Panstruga - Molecular plant pathology, 2019 - ncbi.nlm.nih.gov
More than 10 years of extensive efforts since the dawn of highthroughput sequencing have
resulted in a wealth of genome data for filamentous plant pathogens and have led to several …

Fine-scale recombination maps of fungal plant pathogens reveal dynamic recombination landscapes and intragenic hotspots

EH Stukenbrock, JY Dutheil - Genetics, 2018 - academic.oup.com
Meiotic recombination is an important driver of evolution. Variability in the intensity of
recombination across chromosomes can affect sequence composition, nucleotide variation …

Evolution and adaptation of forest and crop pathogens in the Anthropocene

P Hessenauer, N Feau, U Gill… - …, 2021 - Am Phytopath Society
Anthropocene marks the era when human activity is making a significant impact on earth, its
ecological and biogeographical systems. The domestication and intensification of …

What have we learned from studies of wild plant-pathogen associations?—the dynamic interplay of time, space and life-history

JJ Burdon, PH Thrall - European Journal of Plant Pathology, 2014 - Springer
The interplay of host and pathogen life history traits with disease epidemiology and the
selective pressures exerted on hosts drives genetic change and the long-term …