First discovered, long out of sight, finally visible: ribosomal DNA
AN Hall, E Morton, C Queitsch - Trends in Genetics, 2022 - cell.com
With the advent of long-read sequencing, previously unresolvable genomic elements are
being revisited in an effort to generate fully complete reference genomes. One such element …
being revisited in an effort to generate fully complete reference genomes. One such element …
[HTML][HTML] The conservation landscape of the human ribosomal RNA gene repeats
S Agrawal, ARD Ganley - PloS one, 2018 - journals.plos.org
Ribosomal RNA gene repeats (rDNA) encode ribosomal RNA, a major component of
ribosomes. Ribosome biogenesis is central to cellular metabolic regulation, and several …
ribosomes. Ribosome biogenesis is central to cellular metabolic regulation, and several …
Variation in human chromosome 21 ribosomal RNA genes characterized by TAR cloning and long-read sequencing
JH Kim, AT Dilthey, R Nagaraja, HS Lee… - Nucleic acids …, 2018 - academic.oup.com
Despite the key role of the human ribosome in protein biosynthesis, little is known about the
extent of sequence variation in ribosomal DNA (rDNA) or its pre-rRNA and rRNA products …
extent of sequence variation in ribosomal DNA (rDNA) or its pre-rRNA and rRNA products …
Screening intragenomic rDNA for dominant variants can provide a consistent retrieval of evolutionarily persistent ITS (rDNA) sequences
TC LaJeunesse, JH Pinzón - Molecular Phylogenetics and Evolution, 2007 - Elsevier
Ribosomal DNA (rDNA) sequences are effectively used to infer the phylogenetic
relationships among organisms at all taxonomic ranks (Avise, 2004). Among eukaryotes …
relationships among organisms at all taxonomic ranks (Avise, 2004). Among eukaryotes …
[HTML][HTML] Integrative rDNAomics—importance of the oldest repetitive fraction of the eukaryote genome
R Symonová - Genes, 2019 - mdpi.com
Nuclear ribosomal RNA (rRNA) genes represent the oldest repetitive fraction universal to all
eukaryotic genomes. Their deeply anchored universality and omnipresence during …
eukaryotic genomes. Their deeply anchored universality and omnipresence during …
[HTML][HTML] Intragenomic rDNA variation-the product of concerted evolution, mutation, or something in between?
The classical model of concerted evolution states that hundreds to thousands of ribosomal
DNA (rDNA) units undergo homogenization, making the multiple copies of the individual …
DNA (rDNA) units undergo homogenization, making the multiple copies of the individual …
[HTML][HTML] A call for direct sequencing of full-length RNAs to identify all modifications
JD Alfonzo, JA Brown, PH Byers, VG Cheung… - Nature …, 2021 - nature.com
A call for direct sequencing of full-length RNAs to identify all modifications | Nature Genetics
Skip to main content Thank you for visiting nature.com. You are using a browser version …
Skip to main content Thank you for visiting nature.com. You are using a browser version …
Ribosomal DNA instability and genome adaptability
D Salim, JL Gerton - Chromosome research, 2019 - Springer
Ribosomes are large, multi-subunit ribonucleoprotein complexes, essential for protein
synthesis. To meet the high cellular demand for ribosomes, all eukaryotes have numerous …
synthesis. To meet the high cellular demand for ribosomes, all eukaryotes have numerous …
A portrait of ribosomal DNA contacts with Hi-C reveals 5S and 45S rDNA anchoring points in the folded human genome
Ribosomal RNAs (rRNAs) account for> 60% of all RNAs in eukaryotic cells and are encoded
in the ribosomal DNA (rDNA) arrays. The rRNAs are produced from two sets of loci: the 5S …
in the ribosomal DNA (rDNA) arrays. The rRNAs are produced from two sets of loci: the 5S …
[HTML][HTML] Implications of sequence variation on the evolution of rRNA
MM Parks, CM Kurylo, JE Batchelder… - Chromosome …, 2019 - Springer
The evolution of the multi-copy family of ribosomal RNA (rRNA) genes is unique in regard to
its genetics and genome evolution. Paradoxically, rRNA genes are highly homogenized …
its genetics and genome evolution. Paradoxically, rRNA genes are highly homogenized …