Conformational ensembles of the human intrinsically disordered proteome

G Tesei, AI Trolle, N Jonsson, J Betz, FE Knudsen… - Nature, 2024 - nature.com
Intrinsically disordered proteins and regions (collectively, IDRs) are pervasive across
proteomes in all kingdoms of life, help to shape biological functions and are involved in …

[HTML][HTML] On the potential of machine learning to examine the relationship between sequence, structure, dynamics and function of intrinsically disordered proteins

K Lindorff-Larsen, BB Kragelund - Journal of Molecular Biology, 2021 - Elsevier
Intrinsically disordered proteins (IDPs) constitute a broad set of proteins with few uniting and
many diverging properties. IDPs—and intrinsically disordered regions (IDRs) interspersed …

[HTML][HTML] Structural biases in disordered proteins are prevalent in the cell

D Moses, K Guadalupe, F Yu, E Flores… - Nature Structural & …, 2024 - nature.com
Intrinsically disordered proteins and protein regions (IDPs) are prevalent in all proteomes
and are essential to cellular function. Unlike folded proteins, IDPs exist in an ensemble of …

Introduction to intrinsically disordered proteins and regions

CJ Oldfield, VN Uversky, AK Dunker… - Intrinsically disordered …, 2019 - Elsevier
Intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs) are
fascinating dynamic conformational ensembles that are observed under physiological …

[HTML][HTML] CIDER: resources to analyze sequence-ensemble relationships of intrinsically disordered proteins

AS Holehouse, RK Das, JN Ahad, MOG Richardson… - Biophysical journal, 2017 - cell.com
Intrinsically disordered proteins and regions (IDPs) represent a large class of proteins that
are defined by conformational heterogeneity and lack of persistent tertiary/secondary …

Design of intrinsically disordered protein variants with diverse structural properties

F Pesce, A Bremer, G Tesei, JB Hopkins, CR Grace… - Science …, 2024 - science.org
Intrinsically disordered proteins (IDPs) perform a broad range of functions in biology,
suggesting that the ability to design IDPs could help expand the repertoire of proteins with …

[图书][B] Structure and function of intrinsically disordered proteins

P Tompa, A Fersht - 2009 - taylorfrancis.com
The existence and functioning of intrinsically disordered proteins (IDPs) challenge the
classical structure-function paradigm that equates function with a well-defined 3D structure …

Direct prediction of intrinsically disordered protein conformational properties from sequence

JM Lotthammer, GM Ginell, D Griffith, R Emenecker… - Biophysical …, 2024 - cell.com
Intrinsically disordered regions (IDRs) are ubiquitous across all domains of life and play a
range of functional roles. While folded domains are generally well-described by a stable 3D …

SOURSOP: A Python package for the analysis of simulations of intrinsically disordered proteins

JM Lalmansingh, AT Keeley, KM Ruff… - Journal of Chemical …, 2023 - ACS Publications
Conformational heterogeneity is a defining hallmark of intrinsically disordered proteins and
protein regions (IDRs). The functions of IDRs and the emergent cellular phenotypes they …

[HTML][HTML] Sequence-to-conformation relationships of disordered regions tethered to folded domains of proteins

A Mittal, AS Holehouse, MC Cohan… - Journal of molecular …, 2018 - Elsevier
Intrinsically disordered proteins and regions (IDPs/IDRs) are characterized by well-defined
sequence-to-conformation relationships (SCRs). These relationships refer to the sequence …