[HTML][HTML] SDM6A: a web-based integrative machine-learning framework for predicting 6mA sites in the rice genome

S Basith, B Manavalan, TH Shin, G Lee - Molecular Therapy-Nucleic Acids, 2019 - cell.com
DNA N 6-adenine methylation (6mA) is an epigenetic modification in prokaryotes and
eukaryotes. Identifying 6mA sites in rice genome is important in rice epigenetics and …

[HTML][HTML] SNNRice6mA: a deep learning method for predicting DNA N6-methyladenine sites in rice genome

H Yu, Z Dai - Frontiers in genetics, 2019 - frontiersin.org
DNA N6-methyladenine (6mA) is an important epigenetic modification, which is involved in
many biology regulation processes. An accurate and reliable method for 6mA identification …

Spinenet-6ma: A novel deep learning tool for predicting dna n6-methyladenine sites in genomes

Z Abbas, H Tayara, K to Chong - IEEE Access, 2020 - ieeexplore.ieee.org
DNA N6-methyladenine (6mA) has subsequently been identified as an important epigenetic
modification which plays an important role in various cellular processes. The precise …

[HTML][HTML] iDNA6mA-Rice: a computational tool for detecting N6-methyladenine sites in rice

H Lv, FY Dao, ZX Guan, D Zhang, JX Tan… - Frontiers in …, 2019 - frontiersin.org
DNA N6-methyladenine (6mA) is a dominant DNA modification form and involved in many
biological functions. The accurate genome-wide identification of 6mA sites may increase …

i6mA-Pred: identifying DNA N6-methyladenine sites in the rice genome

W Chen, H Lv, F Nie, H Lin - Bioinformatics, 2019 - academic.oup.com
Abstract Motivation DNA N6-methyladenine (6mA) is associated with a wide range of
biological processes. Since the distribution of 6mA site in the genome is non-random …

A convolutional neural network using dinucleotide one-hot encoder for identifying DNA N6-methyladenine sites in the rice genome

Z Lv, H Ding, L Wang, Q Zou - Neurocomputing, 2021 - Elsevier
Abstract N6-methyladenine (m 6 A) is one of the crucial epigenetic modifications and is
related to the control of various DNA processes. Carrying out a genome-wide m 6 A analysis …

Meta-i6mA: an interspecies predictor for identifying DNA N6-methyladenine sites of plant genomes by exploiting informative features in an integrative machine …

MM Hasan, S Basith, MS Khatun, G Lee… - Briefings in …, 2021 - academic.oup.com
Abstract DNA N 6-methyladenine (6mA) represents important epigenetic modifications,
which are responsible for various cellular processes. The accurate identification of 6mA sites …

iDNA6mA (5-step rule): Identification of DNA N6-methyladenine sites in the rice genome by intelligent computational model via Chou's 5-step rule

M Tahir, H Tayara, KT Chong - Chemometrics and Intelligent Laboratory …, 2019 - Elsevier
DNA methylation is an elementary epigenetic process. The N6-methyladenine is related to a
large kind of biological processes ie, transcription, DNA replication, and repair. In genome …

[HTML][HTML] M6AMRFS: robust prediction of N6-methyladenosine sites with sequence-based features in multiple species

X Qiang, H Chen, X Ye, R Su, L Wei - Frontiers in genetics, 2018 - frontiersin.org
As one of the well-studied RNA methylation modifications, N6-methyladenosine (m6A) plays
important roles in various biological progresses, such as RNA splicing and degradation, etc …

Distance-based support vector machine to predict DNA N6-methyladenine modification

H Zhang, Q Zou, Y Ju, C Song, D Chen - Current Bioinformatics, 2022 - ingentaconnect.com
Background: DNA N6-methyladenine plays an important role in the restriction-modification
system to isolate invasion from adventive DNA. The shortcomings of the high time …