[HTML][HTML] Integrative modelling of the influence of MAPK network on cancer cell fate decision

L Grieco, L Calzone, I Bernard-Pierrot… - PLoS computational …, 2013 - journals.plos.org
The Mitogen-Activated Protein Kinase (MAPK) network consists of tightly interconnected
signalling pathways involved in diverse cellular processes, such as cell cycle, survival …

[HTML][HTML] Computational modeling of PI3K/AKT and MAPK signaling pathways in melanoma cancer

F Pappalardo, G Russo, S Candido, M Pennisi… - PLoS …, 2016 - journals.plos.org
Background Malignant melanoma is an aggressive tumor of the skin and seems to be
resistant to current therapeutic approaches. Melanocytic transformation is thought to occur …

Modeling signaling networks to advance new cancer therapies

J Saez-Rodriguez, A MacNamara… - Annual review of …, 2015 - annualreviews.org
Cell signaling pathways control cells' responses to their environment through an intricate
network of proteins and small molecules partitioned by intracellular structures, such as the …

Systems analysis of MAPK signal transduction

N Blüthgen, S Legewie - Essays in biochemistry, 2008 - portlandpress.com
For more than a decade, the MAPK (mitogen-activated protein kinase) cascade has been
studied using mathematical modelling and quantitative experimentation. The MAPK cascade …

[HTML][HTML] A mechanistic pan-cancer pathway model informed by multi-omics data interprets stochastic cell fate responses to drugs and mitogens

M Bouhaddou, AM Barrette, AD Stern… - PLoS computational …, 2018 - journals.plos.org
Most cancer cells harbor multiple drivers whose epistasis and interactions with expression
context clouds drug and drug combination sensitivity prediction. We constructed a …

Automatic decomposition of kinetic models of signaling networks minimizing the retroactivity among modules

J Saez-Rodriguez, S Gayer, M Ginkel, ED Gilles - Bioinformatics, 2008 - academic.oup.com
Motivation: The modularity of biochemical networks in general, and signaling networks in
particular, has been extensively studied over the past few years. It has been proposed to be …

[HTML][HTML] Crosstalk and signaling switches in mitogen-activated protein kinase cascades

D Fey, DR Croucher, W Kolch… - Frontiers in physiology, 2012 - frontiersin.org
Mitogen-activated protein kinase (MAPK) cascades control cell fate decisions, such as
proliferation, differentiation, and apoptosis by integrating and processing intra-and …

[HTML][HTML] When kinases meet mathematics: the systems biology of MAPK signalling

W Kolch, M Calder, D Gilbert - FEBS letters, 2005 - Elsevier
The mitogen activated protein kinase/extracellular signal regulated kinase pathway
regulates fundamental cellular function such as cell proliferation, survival, differentiation and …

[HTML][HTML] Boolean network model for cancer pathways: predicting carcinogenesis and targeted therapy outcomes

HF Fumia, ML Martins - PloS one, 2013 - journals.plos.org
A Boolean dynamical system integrating the main signaling pathways involved in cancer is
constructed based on the currently known protein-protein interaction network. This system …

Cancer systems biology: a network modeling perspective

PK Kreeger, DA Lauffenburger - Carcinogenesis, 2010 - academic.oup.com
Cancer is now appreciated as not only a highly heterogenous pathology with respect to cell
type and tissue origin but also as a disease involving dysregulation of multiple pathways …