Genome-wide gene expression tuning reveals diverse vulnerabilities of M. tuberculosis

B Bosch, MA DeJesus, NC Poulton, W Zhang… - Cell, 2021 - cell.com
Antibacterial agents target the products of essential genes but rarely achieve complete
target inhibition. Thus, the all-or-none definition of essentiality afforded by traditional genetic …

CRISPRi chemical genetics and comparative genomics identify genes mediating drug potency in Mycobacterium tuberculosis

S Li, NC Poulton, JS Chang, ZA Azadian… - Nature …, 2022 - nature.com
Mycobacterium tuberculosis (Mtb) infection is notoriously difficult to treat. Treatment efficacy
is limited by Mtb's intrinsic drug resistance, as well as its ability to evolve acquired resistance …

Mapping and manipulating the Mycobacterium tuberculosis transcriptome using a transcription factor overexpression-derived regulatory network

TR Rustad, KJ Minch, S Ma, JK Winkler, S Hobbs… - Genome biology, 2014 - Springer
Background Mycobacterium tuberculosis senses and responds to the shifting and hostile
landscape of the host. To characterize the underlying intertwined gene regulatory network …

Global Assessment of Genomic Regions Required for Growth in Mycobacterium tuberculosis

YJ Zhang, TR Ioerger, C Huttenhower, JE Long… - 2012 - journals.plos.org
Identifying genomic elements required for viability is central to our understanding of the
basic physiology of bacterial pathogens. Recently, the combination of high-density …

Unique Transcriptome Signature of Mycobacterium tuberculosis in Pulmonary Tuberculosis

H Rachman, M Strong, T Ulrichs, L Grode… - Infection and …, 2006 - Am Soc Microbiol
Although tuberculosis remains a substantial global threat, the mechanisms that enable
mycobacterial persistence and replication within the human host are ill defined. This study …

Comprehensive insights into transcriptional adaptation of intracellular mycobacteria by microbe-enriched dual RNA sequencing

RA Rienksma, M Suarez-Diez, HJ Mollenkopf… - BMC genomics, 2015 - Springer
Abstract Background The human pathogen Mycobacterium tuberculosis has the capacity to
escape eradication by professional phagocytes. During infection, M. tuberculosis resists the …

Defining the Transcriptional and Post-transcriptional Landscapes of Mycobacterium smegmatis in Aerobic Growth and Hypoxia

MC Martini, Y Zhou, H Sun, SS Shell - Frontiers in microbiology, 2019 - frontiersin.org
The ability of Mycobacterium tuberculosis to infect, proliferate, and survive during long
periods in the human lungs largely depends on the rigorous control of gene expression …

Pathogenesis in tuberculosis: transcriptomic approaches to unraveling virulence mechanisms and finding new drug targets

S Mukhopadhyay, S Nair… - FEMS microbiology …, 2012 - academic.oup.com
Tuberculosis (TB) remains a major health problem worldwide. Attempts to control this
disease have proved difficult owing to our poor understanding of the pathobiology of …

Arrayed CRISPRi and quantitative imaging describe the morphotypic landscape of essential mycobacterial genes

TJ de Wet, KR Winkler, M Mhlanga, V Mizrahi… - Elife, 2020 - elifesciences.org
Mycobacterium tuberculosis possesses a large number of genes of unknown or predicted
function, undermining fundamental understanding of pathogenicity and drug susceptibility …

Meta-analysis of human gene expression in response to Mycobacterium tuberculosis infection reveals potential therapeutic targets

Z Wang, S Arat, M Magid-Slav, JR Brown - BMC systems biology, 2018 - Springer
Background With the global emergence of multi-drug resistant strains of Mycobacterium
tuberculosis, new strategies to treat tuberculosis are urgently needed such as therapeutics …