Harnessing non-destructive 3D pathology

JTC Liu, AK Glaser, K Bera, LD True… - Nature biomedical …, 2021 - nature.com
High-throughput methods for slide-free three-dimensional (3D) pathological analyses of
whole biopsies and surgical specimens offer the promise of modernizing traditional …

[HTML][HTML] Three-dimensional imaging and scanning: current and future applications for pathology

N Farahani, A Braun, D Jutt, T Huffman, N Reder… - Journal of pathology …, 2017 - Elsevier
Imaging is vital for the assessment of physiologic and phenotypic details. In the past,
biomedical imaging was heavily reliant on analog, low-throughput methods, which would …

[HTML][HTML] Toward routine use of 3D histopathology as a research tool

N Roberts, D Magee, Y Song, K Brabazon… - The American journal of …, 2012 - Elsevier
Three-dimensional (3D) reconstruction and examination of tissue at microscopic resolution
have significant potential to enhance the study of both normal and disease processes …

Light-sheet microscopy for slide-free non-destructive pathology of large clinical specimens

AK Glaser, NP Reder, Y Chen, EF McCarty… - Nature biomedical …, 2017 - nature.com
For the 1.7 million patients per year in the US who receive a new cancer diagnosis,
treatment decisions are largely based on histopathological specimen examinations …

CUBIC pathology: three-dimensional imaging for pathological diagnosis

S Nojima, EA Susaki, K Yoshida, H Takemoto… - Scientific reports, 2017 - nature.com
The examination of hematoxylin and eosin (H&E)-stained tissues on glass slides by
conventional light microscopy is the foundation for histopathological diagnosis. However …

Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets

I Belevich, M Joensuu, D Kumar, H Vihinen… - PLoS …, 2016 - journals.plos.org
Understanding the structure–function relationship of cells and organelles in their natural
context requires multidimensional imaging. As techniques for multimodal 3-D imaging have …

A survey of methods for 3D histology reconstruction

J Pichat, JE Iglesias, T Yousry, S Ourselin… - Medical image analysis, 2018 - Elsevier
Histology permits the observation of otherwise invisible structures of the internal topography
of a specimen. Although it enables the investigation of tissues at a cellular level, it is invasive …

[HTML][HTML] X-ray micro-computed tomography for nondestructive three-dimensional (3D) X-ray histology

OL Katsamenis, M Olding, JA Warner… - The American journal of …, 2019 - Elsevier
Historically, micro-computed tomography (μCT) has been considered unsuitable for
histologic analysis of unstained formalin-fixed, paraffin-embedded soft tissue biopsy …

Multiplex, quantitative cellular analysis in large tissue volumes with clearing-enhanced 3D microscopy (Ce3D)

W Li, RN Germain, MY Gerner - Proceedings of the …, 2017 - National Acad Sciences
Organ homeostasis, cellular differentiation, signal relay, and in situ function all depend on
the spatial organization of cells in complex tissues. For this reason, comprehensive, high …

Spatial proteomics in three-dimensional intact specimens

HS Bhatia, AD Brunner, F Öztürk, S Kapoor, Z Rong… - Cell, 2022 - cell.com
Spatial molecular profiling of complex tissues is essential to investigate cellular function in
physiological and pathological states. However, methods for molecular analysis of large …