Full mitochondrial genome sequences reveal new insights about post-glacial expansion and regional phylogeographic structure in the Atlantic silverside (Menidia …

RN Lou, NK Fletcher, AP Wilder, DO Conover… - Marine Biology, 2018 - Springer
One of the biggest challenges in population genetics of marine species is to uncover subtle
phylogeographic patterns masked by large effective population sizes and/or high gene flow …

[HTML][HTML] Mitochondrial genomes reveal mid-Pleistocene population divergence, and post-glacial expansion, in Australasian snapper (Chrysophrys auratus)

T Oosting, L Martínez-García, G Ferrari, AJF Verry… - Heredity, 2023 - nature.com
Glacial cycles play important roles in determining the phylogeographic structure of terrestrial
species, however, relatively little is known about their impacts on the distribution of marine …

Chromosome-level assembly of the Atlantic silverside genome reveals extreme levels of sequence diversity and structural genetic variation

A Tigano, A Jacobs, AP Wilder, A Nand… - Genome Biology and …, 2021 - academic.oup.com
The levels and distribution of standing genetic variation in a genome can provide a wealth of
insights about the adaptive potential, demographic history, and genome structure of a …

Lineage splitting, secondary contacts and genetic admixture of a widely distributed marine invertebrate

R Pérez‐Portela, M Rius, A Villamor - Journal of Biogeography, 2017 - Wiley Online Library
Aim We explore the genetic structure of the widespread starfish, Marthasterias spp., in order
to:(1) identify historical causes of genetic divergence,(2) test the effect of past climatic events …

A comprehensive non-redundant reference transcriptome for the Atlantic silverside Menidia menidia

NO Therkildsen, H Baumann - Marine genomics, 2020 - Elsevier
Abstract The Atlantic silverside (Menidia menidia) has been the focus of extensive research
efforts in ecology, evolutionary biology, and physiology over the past three decades, but lack …

Finding stories in noise: Mitochondrial portraits from RAD data

CS Stobie, MJ Cunningham… - Molecular ecology …, 2019 - Wiley Online Library
Mitochondrial DNA (mtDNA) has formed the backbone of phylogeographic research for
many years; however, recent trends focus on genome‐wide analyses. One method …

Mitogenome phylogeographic analysis of a planktonic crustacean

PD Fields, DJ Obbard, SJ McTaggart, Y Galimov… - Molecular Phylogenetics …, 2018 - Elsevier
Phylogeography places population genetics in an explicitly spatial context, and in doing so
attempts to reconstruct the historical and contemporary evolutionary processes acting across …

Contrasting signals from multiple markers illuminate population connectivity in a marine fish

M SALA‐BOZANO, V Ketmaier, S Mariani - Molecular ecology, 2009 - Wiley Online Library
Recent advances in molecular biology and bioinformatics have helped to unveil striking and
previously unrecognized patterns of geographic genetic structure in marine populations …

Intraspecific Phylogeographic Genomics From Multiple Complete mtDNA Genomes in Atlantic Cod (Gadus morhua): Origins of the “Codmother,” Transatlantic …

SM Carr, HD Marshall - Genetics, 2008 - academic.oup.com
On the basis of multiple complete mitochondrial DNA genome sequences, we describe the
temporal phylogeography of Atlantic cod (Gadus morhua), a lineage that has undergone a …

Mitogenome sequence variation in migratory and stationary ecotypes of North-east Atlantic cod

BO Karlsen, Å Emblem, TE Jørgensen, KA Klingan… - Marine genomics, 2014 - Elsevier
Sequencing of mitochondrial gene fragments from specimens representing a wide range of
geographical locations has indicated limited population structuring in Atlantic cod (Gadus …