Controlling gene expression in response to stress

E De Nadal, G Ammerer, F Posas - Nature Reviews Genetics, 2011 - nature.com
Acute stress puts cells at risk, and rapid adaptation is crucial for maximizing cell survival.
Cellular adaptation mechanisms include modification of certain aspects of cell physiology …

Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation

L López-Maury, S Marguerat, J Bähler - Nature Reviews Genetics, 2008 - nature.com
Organisms are constantly exposed to a wide range of environmental changes, including
both short-term changes during their lifetime and longer-term changes across generations …

Genome‐wide transcriptional plasticity underlies cellular adaptation to novel challenge

S Stern, T Dror, E Stolovicki, N Brenner… - Molecular Systems …, 2007 - embopress.org
Cells adjust their transcriptional state to accommodate environmental and genetic
perturbations. An open question is to what extent transcriptional response to perturbations …

Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation

O Shalem, O Dahan, M Levo, MR Martinez… - Molecular systems …, 2008 - embopress.org
The state of the transcriptome reflects a balance between mRNA production and
degradation. Yet how these two regulatory arms interact in shaping the kinetics of the …

[HTML][HTML] Osmostress‐induced gene expression–a model to understand how stress‐activated protein kinases (SAPKs) regulate transcription

E De Nadal, F Posas - The FEBS journal, 2015 - ncbi.nlm.nih.gov
Adaptation is essential for maximizing cell survival and for cell fitness in response to sudden
changes in the environment. Several aspects of cell physiology change during adaptation …

Transcriptional response to stress is pre-wired by promoter and enhancer architecture

A Vihervaara, DB Mahat, MJ Guertin, T Chu… - Nature …, 2017 - nature.com
Programs of gene expression are executed by a battery of transcription factors that
coordinate divergent transcription from a pair of tightly linked core initiation regions of …

Physiological mechanisms of stress-induced evolution

EA Mojica, D Kültz - Journal of Experimental Biology, 2022 - journals.biologists.com
Organisms mount the cellular stress response whenever environmental parameters exceed
the range that is conducive to maintaining homeostasis. This response is critical for survival …

The effect of stress on genome regulation and structure

A Madlung, L Comai - Annals of botany, 2004 - academic.oup.com
Background Stresses exert evolutionary pressures on all organisms, which have developed
sophisticated responses to cope and survive. These responses involve cellular physiology …

Stress-activated genomic expression changes serve a preparative role for impending stress in yeast

DB Berry, AP Gasch - Molecular biology of the cell, 2008 - Am Soc Cell Biol
Yeast cells respond to stress by mediating condition-specific gene expression changes and
by mounting a common response to many stresses, called the environmental stress …

The biological limitations of transcriptomics in elucidating stress and stress responses

ME Feder, JC Walser - Journal of evolutionary biology, 2005 - academic.oup.com
Global analysis of mRNA abundance via genomic arrays (ie transcriptomics or
transcriptional profiling) is one approach to finding the genes that matter to organisms …