Lake sedimentary DNA research on past terrestrial and aquatic biodiversity: Overview and recommendations

E Capo, C Giguet-Covex, A Rouillard, K Nota… - Quaternary, 2021 - mdpi.com
The use of lake sedimentary DNA to track the long-term changes in both terrestrial and
aquatic biota is a rapidly advancing field in paleoecological research. Although largely …

Ancient DNA from lake sediments: bridging the gap between paleoecology and genetics

LL Anderson-Carpenter, JS McLachlan… - BMC evolutionary …, 2011 - Springer
Background Quaternary plant ecology in much of the world has historically relied on
morphological identification of macro-and microfossils from sediments of small freshwater …

New insights on lake sediment DNA from the catchment: Importance of taphonomic and analytical issues on the record quality

C Giguet-Covex, GF Ficetola, K Walsh, J Poulenard… - Scientific Reports, 2019 - nature.com
Over the last decade, an increasing number of studies have used lake sediment DNA to
trace past landscape changes, agricultural activities or human presence. However, the …

Environmental DNA in lake sediment reveals biogeography of native genetic diversity

HT Nelson‐Chorney, CS Davis… - Frontiers in Ecology …, 2019 - Wiley Online Library
Understanding the historical distributions of species is vital to the conservation and
restoration of native species, yet such information is often qualitative. We show that the …

Reconstructing long‐term human impacts on plant communities: An ecological approach based on lake sediment DNA

J Pansu, C Giguet‐Covex, GF Ficetola… - Molecular …, 2015 - Wiley Online Library
Paleoenvironmental studies are essential to understand biodiversity changes over long
timescales and to assess the relative importance of anthropogenic and environmental …

DNA-based methods in paleolimnology: new opportunities for investigating long-term dynamics of lacustrine biodiversity

I Domaizon, A Winegardner, E Capo, J Gauthier… - Journal of …, 2017 - Springer
The emergence of DNA analyses of lake sediments has opened up many new areas of
inquiry, including the study of taxa that were traditionally not considered in paleolimnology …

[PDF][PDF] Investigating the effects of anthropogenic stressors on lake biota using sedimentary DNA

C Barouillet, ME Monchamp, S Bertilsson… - Freshwater …, 2022 - diva-portal.org
Analyses of sedimentary DNA (sedDNA) have increased exponentially over the last decade
and hold great potential to study the effects of anthropogenic stressors on lake biota over …

[HTML][HTML] Environmental DNA–An emerging tool in conservation for monitoring past and present biodiversity

PF Thomsen, E Willerslev - Biological conservation, 2015 - Elsevier
The continuous decline in Earth's biodiversity represents a major crisis and challenge for the
21st century, and there is international political agreement to slow down or halt this decline …

Detection of fish sedimentary DNA in aquatic systems: A review of methodological challenges and future opportunities

GP Huston, MLD Lopez, Y Cheng, L King… - Environmental …, 2023 - Wiley Online Library
Environmental DNA studies have proliferated over the last decade, with promising data
describing the diversity of organisms inhabiting aquatic and terrestrial ecosystems. The …

Ancient DNA from marine sediments: Precautions and considerations for seafloor coring, sample handling and data generation

LH Armbrecht, MJL Coolen, F Lejzerowicz… - Earth-Science …, 2019 - Elsevier
The study of ancient DNA (aDNA) from sediments (sed aDNA) offers great potential for
paleoclimate interpretation, and has recently been applied as a tool to characterise past …