Lineage‐specific plastid degradation in subtribe Gentianinae (Gentianaceae)

PC Fu, SS Sun, AD Twyford, BB Li… - Ecology and …, 2021 - Wiley Online Library
The structure and sequence of plastid genomes is highly conserved across most land plants,
except for a minority of lineages that show gene loss and genome degradation …

Strong plastid degradation is consistent within section Chondrophyllae, the most speciose lineage of Gentiana

PC Fu, SL Chen, SS Sun, A Favre - Ecology and Evolution, 2022 - Wiley Online Library
Recovering phylogenetic relationships in lineages experiencing intense diversification has
always been a persistent challenge in evolutionary studies, including in Gentiana section …

[HTML][HTML] Plastome phylogenomic study of Gentianeae (Gentianaceae): widespread gene tree discordance and its association with evolutionary rate heterogeneity of …

X Zhang, Y Sun, JB Landis, Z Lv, J Shen, H Zhang… - BMC Plant …, 2020 - Springer
Background Plastome-scale data have been prevalent in reconstructing the plant Tree of
Life. However, phylogenomic studies currently based on plastomes rely primarily on …

[HTML][HTML] The Complete Plastome Sequences of Seven Species in Gentiana sect. Kudoa (Gentianaceae): Insights Into Plastid Gene Loss and Molecular Evolution

SS Sun, PC Fu, XJ Zhou, YW Cheng… - Frontiers in Plant …, 2018 - frontiersin.org
The chloroplast (cp) genome is useful in the study of phylogenomics, molecular dating, and
molecular evolution. Gentiana sect. Kudoa is a predominantly alpine flowering plant that is …

[HTML][HTML] Comparison of plastid genomes and ITS of two sister species in Gentiana and a discussion on potential threats for the endangered species from hybridization

J Mao, Y Liang, X Wang, D Zhang - BMC Plant Biology, 2023 - Springer
Abstract Background Gentiana rigescens Franchet is an endangered medicinal herb from
the family Gentianaceae with medicinal values. Gentiana cephalantha Franchet is a sister …

Plastomes from tribe Plantagineae (Plantaginaceae) reveal infrageneric structural synapormorphies and localized hypermutation for Plantago and functional loss of …

JP Mower, W Guo, R Partha, W Fan, N Levsen… - Molecular phylogenetics …, 2021 - Elsevier
Abstract Tribe Plantagineae (Plantaginaceae) comprises~ 270 species in three currently
recognized genera (Aragoa, Littorella, Plantago), of which Plantago is most speciose …

[HTML][HTML] Resolving phylogenetic relationships and species delimitations in closely related gymnosperms using high-throughput NGS, Sanger sequencing and …

C Hou, N Wikström, JS Strijk, C Rydin - Plant Systematics and Evolution, 2016 - Springer
Plastid genomes have been widely applied to elucidate plant evolution at higher taxonomic
levels, but have rarely been considered useful for addressing close relationships. Here, we …

Genus-Wide Screening Reveals Four Distinct Types of Structural Plastid Genome Organization in Pelargonium (Geraniaceae)

J Röschenbleck, S Wicke, S Weinl… - Genome Biology and …, 2017 - academic.oup.com
Geraniaceae are known for their unusual plastid genomes (plastomes), with the genus
Pelargonium being most conspicuous with regard to plastome size and gene organization …

[HTML][HTML] Plastid genome data provide new insights into the dynamic evolution of the tribe Ampelopsideae (Vitaceae)

L Zhang, Y Meng, D Wang, GH He, JM Zhang, J Wen… - BMC genomics, 2024 - Springer
Abstract Background Ampelopsideae J. Wen & ZL Nie is a small-sized tribe of Vitaceae
Juss., including ca. 47 species from four genera showing a disjunct distribution worldwide …

Phylotranscriptomics reveals extensive gene duplication in the subtribe Gentianinae (Gentianaceae)

CL Chen, L Zhang, JL Li, XX Mao… - … of Systematics and …, 2021 - Wiley Online Library
Gene duplication plays an important role in plants for diversification and adaptation to new
habitats. In this study, we aim to reconstruct the genome‐scale phylogeny and identify large …