From genotype to phenotype: genetics of mammalian long non-coding RNAs in vivo
D Andergassen, JL Rinn - Nature Reviews Genetics, 2022 - nature.com
Genome-wide sequencing has led to the discovery of thousands of long non-coding RNA
(lncRNA) loci in the human genome, but evidence of functional significance has remained …
(lncRNA) loci in the human genome, but evidence of functional significance has remained …
CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells
INTRODUCTION The human genome contains tens of thousands of loci that produce long
noncoding RNAs (lncRNAs), transcripts that have no apparent protein-coding potential. A …
noncoding RNAs (lncRNAs), transcripts that have no apparent protein-coding potential. A …
Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood
Mammalian genomes contain thousands of loci that transcribe long noncoding RNAs
(lncRNAs),, some of which are known to carry out critical roles in diverse cellular processes …
(lncRNAs),, some of which are known to carry out critical roles in diverse cellular processes …
Screening for lncRNA function
L Koch - Nature Reviews Genetics, 2017 - nature.com
Biological functions are known for only a small number of long non-coding RNAs (lncRNAs).
A study in Science now reports a highly specific, high-throughput CRISPR-based approach …
A study in Science now reports a highly specific, high-throughput CRISPR-based approach …
Efficient in vivo deletion of a large imprinted lncRNA by CRISPR/Cas9
Recent genome-wide studies have revealed that the majority of the mouse genome is
transcribed as non-coding RNAs (ncRNAs) and growing evidence supports the importance …
transcribed as non-coding RNAs (ncRNAs) and growing evidence supports the importance …
Genome-wide screening for functional long noncoding RNAs in human cells by Cas9 targeting of splice sites
Y Liu, Z Cao, Y Wang, Y Guo, P Xu, P Yuan, Z Liu… - Nature …, 2018 - nature.com
The functions of many long noncoding RNAs (lncRNAs) in the human genome remain
unknown owing to the lack of scalable loss-of-function screening tools. We previously used …
unknown owing to the lack of scalable loss-of-function screening tools. We previously used …
Computational prediction and experimental validation identify functionally conserved lncRNAs from zebrafish to human
Functional studies of long noncoding RNAs (lncRNAs) have been hindered by the lack of
methods to assess their evolution. Here we present lncRNA Homology Explorer (lncHOME) …
methods to assess their evolution. Here we present lncRNA Homology Explorer (lncHOME) …
Genome-scale deletion screening of human long non-coding RNAs using a paired-guide RNA CRISPR–Cas9 library
CRISPR–Cas9 screens have been widely adopted to analyze coding-gene functions, but
high-throughput screening of non-coding elements using this method is more challenging …
high-throughput screening of non-coding elements using this method is more challenging …
Platforms for investigating LncRNA functions
JL Charles Richard… - … : Translating Life Sciences …, 2018 - journals.sagepub.com
Prior to the sequencing of the human genome, it was presumed that most of the DNA coded
for proteins. However, with the advent of next-generation sequencing, it has now been …
for proteins. However, with the advent of next-generation sequencing, it has now been …
Modulating the expression of long non‐coding RNA s for functional studies
Long non‐coding RNA s (lnc RNA s) have emerged as important regulators of cell biology.
The mechanisms by which lnc RNA s function are likely numerous, and most are poorly …
The mechanisms by which lnc RNA s function are likely numerous, and most are poorly …