[HTML][HTML] Rational design of enzyme activity and enantioselectivity

Z Song, Q Zhang, W Wu, Z Pu, H Yu - Frontiers in Bioengineering and …, 2023 - frontiersin.org
The strategy of rational design to engineer enzymes is to predict the potential mutants based
on the understanding of the relationships between protein structure and function, and …

Computer-aided understanding and engineering of enzymatic selectivity

L Wu, L Qin, Y Nie, Y Xu, YL Zhao - Biotechnology Advances, 2022 - Elsevier
Abstract Enzymes offering chemo-, regio-, and stereoselectivity enable the asymmetric
synthesis of high-value chiral molecules. Unfortunately, the drawback that naturally …

Rational and semirational protein design

IV Korendovych - Protein engineering: methods and protocols, 2018 - Springer
This mini review gives an overview over different design approaches and methodologies
applied in rational and semirational enzyme engineering. The underlying principles for …

Protein engineering design from directed evolution to de novo synthesis

W Xiong, B Liu, Y Shen, K Jing, TR Savage - Biochemical Engineering …, 2021 - Elsevier
With the development of enzyme engineering technology, green enzyme catalysis is widely
poised to replace traditional chemical catalysis enabling high enantioselectivity and yielding …

Making enzymes suitable for organic chemistry by rational protein design

M Reetz - ChemBioChem, 2022 - Wiley Online Library
This review outlines recent developments in protein engineering of stereo‐and
regioselective enzymes, which are of prime interest in organic and pharmaceutical chemistry …

Tailoring new enzyme functions by rational redesign

F Cedrone, A Ménez, E Quéméneur - Current opinion in structural biology, 2000 - Elsevier
Site-directed mutagenesis is still a very efficient strategy to elaborate improved enzymes.
Recently, advances have been made in developing rational strategies aimed at reshaping …

[HTML][HTML] Recent advances in rational approaches for enzyme engineering

K Steiner, H Schwab - Computational and structural biotechnology journal, 2012 - Elsevier
Enzymes are an attractive alternative in the asymmetric syntheses of chiral building blocks.
To meet the requirements of industrial biotechnology and to introduce new functionalities …

Motif‐directed redesign of enzyme specificity

B Borgo, JJ Havranek - Protein Science, 2014 - Wiley Online Library
Computational protein design relies on several approximations, including the use of fixed
backbones and rotamers, to reduce protein design to a computationally tractable problem …

AsiteDesign: a Semirational Algorithm for an Automated Enzyme Design

S Roda, H Terholsen, JRH Meyer… - The Journal of …, 2023 - ACS Publications
With advances in protein structure predictions, the number of available high-quality
structures has increased dramatically. In light of these advances, structure-based enzyme …

De novo design of biocatalysts

DN Bolon, CA Voigt, SL Mayo - Current opinion in chemical biology, 2002 - Elsevier
The challenging field of de novo enzyme design is beginning to produce exciting results.
The application of powerful computational methods to functional protein design has recently …