An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.)

S Parween, K Nawaz, R Roy, AK Pole… - Scientific reports, 2015 - nature.com
Chickpea (Cicer arietinum L.) is an important pulse legume crop. We previously reported a
draft genome assembly of the desi chickpea cultivar ICC 4958. Here we report an advanced …

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.)

M Jain, G Misra, RK Patel, P Priya, S Jhanwar… - The Plant …, 2013 - Wiley Online Library
Cicer arietinum L.(chickpea) is the third most important food legume crop. We have
generated the draft sequence of a desi‐type chickpea genome using next‐generation …

Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement

S Gupta, K Nawaz, S Parween, R Roy, K Sahu… - DNA …, 2017 - academic.oup.com
Cicer reticulatum L. is the wild progenitor of the fourth most important legume crop chickpea
(C. arietinum L.). We assembled short-read sequences into 416 Mb draft genome of C …

A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies

P Ruperao, CKK Chan, S Azam… - Plant biotechnology …, 2014 - Wiley Online Library
With the expansion of next‐generation sequencing technology and advanced
bioinformatics, there has been a rapid growth of genome sequencing projects. However …

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

RK Varshney, C Song, RK Saxena, S Azam, S Yu… - Nature …, 2013 - nature.com
Chickpea (Cicer arietinum) is the second most widely grown legume crop after soybean,
accounting for a substantial proportion of human dietary nitrogen intake and playing a …

Genome wide SNP identification in chickpea for use in development of a high density genetic map and improvement of chickpea reference genome assembly

AA Deokar, L Ramsay, AG Sharpe, M Diapari… - BMC genomics, 2014 - Springer
Background In the whole genome sequencing, genetic map provides an essential
framework for accurate and efficient genome assembly and validation. The main objectives …

High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea

R Gaur, G Jeena, N Shah, S Gupta, S Pradhan… - Scientific reports, 2015 - nature.com
This study presents genome-wide discovery of SNPs through next generation sequencing of
the genome of Cicer reticulatum. Mapping of the C. reticulatum sequenced reads onto the …

Comprehensive Transcriptome Assembly of Chickpea (Cicer arietinum L.) Using Sanger and Next Generation Sequencing Platforms: Development and Applications

H Kudapa, S Azam, AG Sharpe, B Taran, R Li… - PloS one, 2014 - journals.plos.org
A comprehensive transcriptome assembly of chickpea has been developed using 134.95
million Illumina single-end reads, 7.12 million single-end FLX/454 reads and 139,214 …

Advances in chickpea genomics

PM Gaur, M Thudi, S Samineni, RK Varshney - Legumes in the omic era, 2014 - Springer
Abstract Chickpea (Cicer arietinum L.), the second largest consumed pulse crop of the world
after common bean, is grown in over 50 countries and traded across 140 countries. After …

CTDB: an integrated chickpea transcriptome database for functional and applied genomics

M Verma, V Kumar, RK Patel, R Garg, M Jain - PloS one, 2015 - journals.plos.org
Chickpea is an important grain legume used as a rich source of protein in human diet. The
narrow genetic diversity and limited availability of genomic resources are the major …