The ENIGMA Toolbox: multiscale neural contextualization of multisite neuroimaging datasets
Through harmonized procedures and by sharing site-specific brain metrics (for example,
cortical thickness) or aggregated statistical maps, ENIGMA has set the stage for large-scale …
cortical thickness) or aggregated statistical maps, ENIGMA has set the stage for large-scale …
[HTML][HTML] Neuromaps: structural and functional interpretation of brain maps
Imaging technologies are increasingly used to generate high-resolution reference maps of
brain structure and function. Comparing experimentally generated maps to these reference …
brain structure and function. Comparing experimentally generated maps to these reference …
[HTML][HTML] Micapipe: A pipeline for multimodal neuroimaging and connectome analysis
Multimodal magnetic resonance imaging (MRI) has accelerated human neuroscience by
fostering the analysis of brain microstructure, geometry, function, and connectivity across …
fostering the analysis of brain microstructure, geometry, function, and connectivity across …
[PDF][PDF] Predicting regional neurodegeneration from the healthy brain functional connectome
J Zhou, ED Gennatas, JH Kramer, BL Miller… - Neuron, 2012 - cell.com
Neurodegenerative diseases target large-scale neural networks. Four competing
mechanistic hypotheses have been proposed to explain network-based disease patterning …
mechanistic hypotheses have been proposed to explain network-based disease patterning …
[HTML][HTML] Whole-brain tissue mapping toolkit using large-scale highly multiplexed immunofluorescence imaging and deep neural networks
Mapping biological processes in brain tissues requires piecing together numerous
histological observations of multiple tissue samples. We present a direct method that …
histological observations of multiple tissue samples. We present a direct method that …
Building better biomarkers: brain models in translational neuroimaging
Despite its great promise, neuroimaging has yet to substantially impact clinical practice and
public health. However, a developing synergy between emerging analysis techniques and …
public health. However, a developing synergy between emerging analysis techniques and …
A community-developed open-source computational ecosystem for big neuro data
To the Editor—Recent technological developments, such as high-throughput imaging and
sequencing, enable experimentalists to collect increasingly large, complex, and …
sequencing, enable experimentalists to collect increasingly large, complex, and …
[HTML][HTML] Inference in the age of big data: Future perspectives on neuroscience
Neuroscience is undergoing faster changes than ever before. Over 100 years our field
qualitatively described and invasively manipulated single or few organisms to gain …
qualitatively described and invasively manipulated single or few organisms to gain …
[HTML][HTML] A FreeSurfer view of the cortical transcriptome generated from the Allen Human Brain Atlas
The Allen Human Brain Atlas provides an anatomically comprehensive view of gene
expression in the brain (Hawrylycz et al., 2012). The complete transcriptome dataset …
expression in the brain (Hawrylycz et al., 2012). The complete transcriptome dataset …
[HTML][HTML] COINS: an innovative informatics and neuroimaging tool suite built for large heterogeneous datasets
A Scott, W Courtney, D Wood, R De la Garza… - Frontiers in …, 2011 - frontiersin.org
The availability of well-characterized neuroimaging data with large numbers of subjects,
especially for clinical populations, is critical to advancing our understanding of the healthy …
especially for clinical populations, is critical to advancing our understanding of the healthy …