The Ensembl gene annotation system
The Ensembl gene annotation system has been used to annotate over 70 different
vertebrate species across a wide range of genome projects. Furthermore, it generates the …
vertebrate species across a wide range of genome projects. Furthermore, it generates the …
Predicting the evolution of syntenies—an algorithmic review
N El-Mabrouk - Algorithms, 2021 - mdpi.com
Syntenies are genomic segments of consecutive genes identified by a certain conservation
in gene content and order. The notion of conservation may vary from one definition to …
in gene content and order. The notion of conservation may vary from one definition to …
De novo European eel transcriptome provides insights into the evolutionary history of duplicated genes in teleost lineages
C Rozenfeld, J Blanca, V Gallego, V García-Carpintero… - PloS one, 2019 - journals.plos.org
Paralogues pairs are more frequently observed in eels (Anguilla sp.) than in other teleosts.
The paralogues often show low phylogenetic distances; however, they have been assigned …
The paralogues often show low phylogenetic distances; however, they have been assigned …
Evolution through segmental duplications and losses: a Super-Reconciliation approach
The classical gene and species tree reconciliation, used to infer the history of gene gain and
loss explaining the evolution of gene families, assumes an independent evolution for each …
loss explaining the evolution of gene families, assumes an independent evolution for each …
Evolutionary history of the human multigene families reveals widespread gene duplications throughout the history of animals
N Pervaiz, N Shakeel, A Qasim, R Zehra… - BMC Evolutionary …, 2019 - Springer
Background The hypothesis that vertebrates have experienced two ancient, whole genome
duplications (WGDs) is of central interest to evolutionary biology and has been implicated in …
duplications (WGDs) is of central interest to evolutionary biology and has been implicated in …
Reconstructing the history of syntenies through super-reconciliation
Classical gene and species tree reconciliation, used to infer the history of gene gain and
loss explaining the evolution of gene families, assumes an independent evolution for each …
loss explaining the evolution of gene families, assumes an independent evolution for each …
An insight into the evolutionary history of human MHC paralogon
R Naz, S Tahir, AA Abbasi - Molecular phylogenetics and evolution, 2017 - Elsevier
The vertebrate genome contains several closely spaced sets of paralogous genes from
distinct gene families on typically two, three or four different chromosomes (paralogons) …
distinct gene families on typically two, three or four different chromosomes (paralogons) …
Development of innovative methods for induction of European eel (Anguilla anguilla) spermatogenesis
C Rozenfeld - 2019 - riunet.upv.es
[CA] Com a espècie de renom culinari que pertany a un dels llinatges teleostis més antics,
amb un cicle vital misteriós, un potencial d'aqüicultura excepcional, i una tradició pesquera …
amb un cicle vital misteriós, un potencial d'aqüicultura excepcional, i una tradició pesquera …
Phylogenetic analyses of human 1/2/8/20 paralogons suggest segmental duplications during animal evolution
Susumu Ohno hypothesized that the diversity of vertebrate gene families and genome is due
to two rounds of whole genome duplications (also referred as 2R hypothesis). The …
to two rounds of whole genome duplications (also referred as 2R hypothesis). The …
[PDF][PDF] Evolution of Human Multigene Families
F Batool, N Pervaiz, Q Khalid, AA Abbasi - eLS - researchgate.net
The hypothesis that all the vertebrates, including humans, share two ancestral rounds of
whole-genome duplications (WGDs/2R) is correct or not has recently become quite …
whole-genome duplications (WGDs/2R) is correct or not has recently become quite …