Artificial intelligence for multimodal data integration in oncology

J Lipkova, RJ Chen, B Chen, MY Lu, M Barbieri… - Cancer cell, 2022 - cell.com
In oncology, the patient state is characterized by a whole spectrum of modalities, ranging
from radiology, histology, and genomics to electronic health records. Current artificial …

Artificial intelligence in histopathology: enhancing cancer research and clinical oncology

A Shmatko, N Ghaffari Laleh, M Gerstung, JN Kather - Nature cancer, 2022 - nature.com
Artificial intelligence (AI) methods have multiplied our capabilities to extract quantitative
information from digital histopathology images. AI is expected to reduce workload for human …

Transformer-based biomarker prediction from colorectal cancer histology: A large-scale multicentric study

SJ Wagner, D Reisenbüchler, NP West, JM Niehues… - Cancer Cell, 2023 - cell.com
Deep learning (DL) can accelerate the prediction of prognostic biomarkers from routine
pathology slides in colorectal cancer (CRC). However, current approaches rely on …

[HTML][HTML] Gastrointestinal cancer classification and prognostication from histology using deep learning: Systematic review

S Kuntz, E Krieghoff-Henning, JN Kather, T Jutzi… - European Journal of …, 2021 - Elsevier
Background Gastrointestinal cancers account for approximately 20% of all cancer diagnoses
and are responsible for 22.5% of cancer deaths worldwide. Artificial intelligence–based …

Artificial intelligence to identify genetic alterations in conventional histopathology

D Cifci, S Foersch, JN Kather - The Journal of Pathology, 2022 - Wiley Online Library
Precision oncology relies on the identification of targetable molecular alterations in tumor
tissues. In many tumor types, a limited set of molecular tests is currently part of standard …

Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study

JM Niehues, P Quirke, NP West, HI Grabsch… - Cell reports …, 2023 - cell.com
Deep learning (DL) can predict microsatellite instability (MSI) from routine histopathology
slides of colorectal cancer (CRC). However, it is unclear whether DL can also predict other …

[HTML][HTML] Artificial intelligence for detection of microsatellite instability in colorectal cancer—a multicentric analysis of a pre-screening tool for clinical application

A Echle, NG Laleh, P Quirke, HI Grabsch, HS Muti… - ESMO open, 2022 - Elsevier
Background Microsatellite instability (MSI)/mismatch repair deficiency (dMMR) is a key
genetic feature which should be tested in every patient with colorectal cancer (CRC) …

DT-MIL: deformable transformer for multi-instance learning on histopathological image

H Li, F Yang, Y Zhao, X Xing, J Zhang, M Gao… - … Image Computing and …, 2021 - Springer
Learning informative representations is crucial for classification and prediction tasks on
histopathological images. Due to the huge image size, whole-slide histopathological image …

Deep learning on histopathological images for colorectal cancer diagnosis: a systematic review

A Davri, E Birbas, T Kanavos, G Ntritsos, N Giannakeas… - Diagnostics, 2022 - mdpi.com
Colorectal cancer (CRC) is the second most common cancer in women and the third most
common in men, with an increasing incidence. Pathology diagnosis complemented with …

Global research trends and foci of artificial intelligence-based tumor pathology: a scientometric study

Z Shen, J Hu, H Wu, Z Chen, W Wu, J Lin, Z Xu… - Journal of Translational …, 2022 - Springer
Background With the development of digital pathology and the renewal of deep learning
algorithm, artificial intelligence (AI) is widely applied in tumor pathology. Previous …