Bulk segregation analysis in the NGS era: a review of its teenage years

Z Li, Y Xu - The Plant Journal, 2022 - Wiley Online Library
Bulk segregation analysis (BSA) utilizes a strategy of pooling individuals with extreme
phenotypes to conduct economical and rapidly linked marker screening or quantitative trait …

Toward the sequence-based breeding in legumes in the post-genome sequencing era

RK Varshney, MK Pandey, A Bohra, VK Singh… - Theoretical and Applied …, 2019 - Springer
Efficiency of breeding programs of legume crops such as chickpea, pigeonpea and
groundnut has been considerably improved over the past decade through deployment of …

Fine mapping and gene cloning in the post-NGS era: advances and prospects

D Jaganathan, A Bohra, M Thudi… - Theoretical and Applied …, 2020 - Springer
Improvement in traits of agronomic importance is the top breeding priority of crop
improvement programs. Majority of these agronomic traits show complex quantitative …

Next generation sequencing based forward genetic approaches for identification and mapping of causal mutations in crop plants: A comprehensive review

PK Sahu, R Sao, S Mondal, G Vishwakarma, SK Gupta… - Plants, 2020 - mdpi.com
The recent advancements in forward genetics have expanded the applications of mutation
techniques in advanced genetics and genomics, ahead of direct use in breeding programs …

Nested‐association mapping (NAM)‐based genetic dissection uncovers candidate genes for seed and pod weights in peanut (Arachis hypogaea)

SS Gangurde, H Wang, S Yaduru… - Plant Biotechnology …, 2020 - Wiley Online Library
Multiparental genetic mapping populations such as nested‐association mapping (NAM)
have great potential for investigating quantitative traits and associated genomic regions …

Translational genomics for achieving higher genetic gains in groundnut

MK Pandey, AK Pandey, R Kumar, CV Nwosu… - Theoretical and Applied …, 2020 - Springer
Key message Groundnut has entered now in post-genome era enriched with optimum
genomic and genetic resources to facilitate faster trait dissection, gene discovery and …

Whole‐genome resequencing‐based QTL‐seq identified candidate genes and molecular markers for fresh seed dormancy in groundnut

R Kumar, P Janila, MK Vishwakarma… - Plant biotechnology …, 2020 - Wiley Online Library
The subspecies fastigiata of cultivated groundnut lost fresh seed dormancy (FSD) during
domestication and human‐made selection. Groundnut varieties lacking FSD experience …

Whole‐genome resequencing‐based QTL‐seq identified AhTc1 gene encoding a R2R3‐MYB transcription factor controlling peanut purple testa colour

Y Zhao, J Ma, M Li, L Deng, G Li, H Xia… - Plant biotechnology …, 2020 - Wiley Online Library
Peanut (Arachis hypogaea. L) is an important oil crop worldwide. The common testa colours
of peanut varieties are pink or red. But the peanut varieties with dark purple testa have been …

Whole‐genome sequencing based discovery of candidate genes and diagnostic markers for seed weight in groundnut

SS Gangurde, AW Khan, P Janila, MT Variath… - The plant …, 2023 - Wiley Online Library
Seed weight in groundnut (Arachis hypogaea L.) has direct impact on yield as well as
market price because of preference for bold seeds by consumers and industry, thereby …

Major QTLs for Resistance to Early and Late Leaf Spot Diseases Are Identified on Chromosomes 3 and 5 in Peanut (Arachis hypogaea)

Y Chu, P Chee, A Culbreath, TG Isleib… - Frontiers in plant …, 2019 - frontiersin.org
Early and late leaf spots (LLSs) are the major foliar diseases of peanut responsible for
severely decreased yield in the absence of intensive fungicide spray programs. Pyramiding …