Viral membrane fusion: a dance between proteins and lipids

JM White, AE Ward, L Odongo… - Annual review of …, 2023 - annualreviews.org
There are at least 21 families of enveloped viruses that infect mammals, and many contain
members of high concern for global human health. All enveloped viruses have a dedicated …

Human papillomavirus genomics: Understanding carcinogenicity

CW Nelson, L Mirabello - Tumour Virus Research, 2023 - Elsevier
Human papillomavirus (HPV) causes virtually all cervical cancers and many cancers at other
anatomical sites in both men and women. However, only 12 of 448 known HPV types are …

The immune modules conserved across the tree of life: Towards a definition of ancestral immunity

A Bernheim, J Cury, EZ Poirier - Plos Biology, 2024 - journals.plos.org
Immune defence mechanisms exist across the tree of life in such diversity that prokaryotic
antiviral responses have historically been considered unrelated to eukaryotic immunity …

Insertions and deletions (indels): a missing piece of the protein engineering jigsaw

CM Miton, N Tokuriki - Biochemistry, 2022 - ACS Publications
Over the years, protein engineers have studied nature and borrowed its tricks to accelerate
protein evolution in the test tube. While there have been considerable advances, our ability …

Investigating the Evolution of Drosophila STING-Dependent Antiviral Innate Immunity by Multispecies Comparison of 2′3′-cGAMP Responses

L Hédelin, A Thiébaut, J Huang, X Li… - Molecular Biology …, 2024 - academic.oup.com
Viruses represent a major threat to all animals, which defend themselves through induction
of a large set of virus-stimulated genes that collectively control the infection. In vertebrates …

Evolutionary immunology to explore original antiviral strategies

JL Imler, H Cai, C Meignin… - … Transactions of the …, 2024 - royalsocietypublishing.org
Over the past 25 years, the field of evolutionary developmental biology (evo–devo) has used
genomics and genetics to gain insight on the developmental mechanisms underlying the …

Systems theory, thermodynamics and life: Integrated thinking across ecology, organization and biological evolution.

KR Skene - Biosystems, 2024 - Elsevier
In this paper we explore the relevance and integration of system theory and thermodynamics
in terms of the Earth system. It is proposed that together, these fields explain the evolution …

Genotype–phenotype landscapes for immune–pathogen coevolution

A Moulana, T Dupic, AM Phillips, MM Desai - Trends in immunology, 2023 - cell.com
Our immune systems constantly coevolve with the pathogens that challenge them, as
pathogens adapt to evade our defense responses, with our immune repertoires shifting in …

Evolution of virus-like features and intrinsically disordered regions in retrotransposon-derived mammalian genes

R Cagliani, D Forni, A Mozzi, R Fuchs… - Molecular Biology …, 2024 - academic.oup.com
Several mammalian genes have originated from the domestication of retrotransposons,
selfish mobile elements related to retroviruses. Some of the proteins encoded by these …

Antiviral function and viral antagonism of the rapidly evolving dynein activating adaptor NINL

DA Stevens, C Beierschmitt, S Mahesula, MR Corley… - Elife, 2022 - elifesciences.org
Viruses interact with the intracellular transport machinery to promote viral replication. Such
host–virus interactions can drive host gene adaptation, leaving signatures of pathogen …