Mass spectrometry-based metabolomics in microbiome investigations
A Bauermeister, H Mannochio-Russo… - Nature Reviews …, 2022 - nature.com
Microbiotas are a malleable part of ecosystems, including the human ecosystem.
Microorganisms affect not only the chemistry of their specific niche, such as the human gut …
Microorganisms affect not only the chemistry of their specific niche, such as the human gut …
microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data
Abstract microbeMASST, a taxonomically informed mass spectrometry (MS) search tool,
tackles limited microbial metabolite annotation in untargeted metabolomics experiments …
tackles limited microbial metabolite annotation in untargeted metabolomics experiments …
Microbial metabolomics: From novel technologies to diversified applications
D Ye, X Li, J Shen, X Xia - TrAC Trends in Analytical Chemistry, 2022 - Elsevier
Microbial metabolomics focuses on the analysis of intracellular or extracellular primary
metabolites, signaling molecules, hormones, and secondary metabolites, and it is an …
metabolites, signaling molecules, hormones, and secondary metabolites, and it is an …
Mass-spectrometry-based microbial metabolomics: recent developments and applications
P Gao, G Xu - Analytical and bioanalytical chemistry, 2015 - Springer
Metabolomics is an omics technique aiming at qualitatively and quantitatively describing a
metabolome by various analytical platforms. It is an indispensable component of modern …
metabolome by various analytical platforms. It is an indispensable component of modern …
Progress and opportunities in microbial community metabolomics
Highlights•Microbiome-associated metabolite pools aid discovery of novel functions.•Guilt-
by-association approaches identify microbial derivatives of standard metabolites.•Machine …
by-association approaches identify microbial derivatives of standard metabolites.•Machine …
Recent developments and applications of metabolomics in microbiological investigations
Metabolomics is the comprehensive (qualitative and quantitative) analysis of all metabolites
within an organism or a biological system. By studying endogenous metabolites produced …
within an organism or a biological system. By studying endogenous metabolites produced …
Microbial metabolomics: toward a platform with full metabolome coverage
MJ van der Werf, KM Overkamp, B Muilwijk… - Analytical …, 2007 - Elsevier
Achieving metabolome data with satisfactory coverage is a formidable challenge in
metabolomics because metabolites are a chemically highly diverse group of compounds …
metabolomics because metabolites are a chemically highly diverse group of compounds …
Emerging mass spectrometry techniques for the direct analysis of microbial colonies
J Fang, PC Dorrestein - Current opinion in microbiology, 2014 - Elsevier
Highlights•Mass spectrometry techniques are powerful tools in studying specialized
metabolites production from microbial colonies.•Direct analysis of microbial colonies can be …
metabolites production from microbial colonies.•Direct analysis of microbial colonies can be …
Untargeted metabolomics
N Vinayavekhin, A Saghatelian - Current protocols in molecular …, 2010 - Wiley Online Library
Along with genes and proteins, metabolites play important roles in sustaining life. Their
functions include “primary” functions in metabolism and energy storage, as well as …
functions include “primary” functions in metabolism and energy storage, as well as …
Comparative mass spectrometry-based metabolomics strategies for the investigation of microbial secondary metabolites
Covering: 2000 to 2016 The labor-intensive process of microbial natural product discovery is
contingent upon identifying discrete secondary metabolites of interest within complex …
contingent upon identifying discrete secondary metabolites of interest within complex …