Similarity-based virtual screening using 2D fingerprints

P Willett - Drug discovery today, 2006 - Elsevier
This paper summarizes recent work at the University of Sheffield on virtual screening
methods that use 2D fingerprint measures of structural similarity. A detailed comparison of a …

Molecular similarity: a key technique in molecular informatics

A Bender, RC Glen - Organic & biomolecular chemistry, 2004 - pubs.rsc.org
Molecular Informatics utilises many ideas and concepts to find relationships between
molecules. The concept of similarity, where molecules may be grouped according to their …

Chemical similarity searching

P Willett, JM Barnard, GM Downs - Journal of chemical information …, 1998 - ACS Publications
This paper reviews the use of similarity searching in chemical databases. It begins by
introducing the concept of similarity searching, differentiating it from the more common …

Do structurally similar molecules have similar biological activity?

YC Martin, JL Kofron… - Journal of medicinal …, 2002 - ACS Publications
To design diverse combinatorial libraries or to select diverse compounds to augment a
screening collection, computational chemists frequently reject compounds that are≥ 0.85 …

Consensus scoring: A method for obtaining improved hit rates from docking databases of three-dimensional structures into proteins

PS Charifson, JJ Corkery, MA Murcko… - Journal of medicinal …, 1999 - ACS Publications
We present the results of an extensive computational study in which we show that combining
scoring functions in an intersection-based consensus approach results in an enhancement …

[图书][B] Multi-sensor data fusion: an introduction

HB Mitchell - 2007 - books.google.com
The purpose of this book is to provide an introduction to the theories and techniques of multi-
sensor data fusion. The book has been designed as a text for a one-semester graduate …

[图书][B] 3D QSAR in drug design: volume 1: theory methods and applications

H Kubinyi - 1993 - books.google.com
Progress in medicinal chemistry and in drug design depends on our ability to understand the
interactions of drugs with their biological targets. Classical QSAR studies describe biological …

Quantitative structure‐activity relationship methods: Perspectives on drug discovery and toxicology

R Perkins, H Fang, W Tong… - … and Chemistry: An …, 2003 - Wiley Online Library
Quantitative structure—activity relationships (QSARs) attempt to correlate chemical structure
with activity using statistical approaches. The QSAR models are useful for various purposes …

Consensus scoring for protein–ligand interactions

M Feher - Drug discovery today, 2006 - Elsevier
This article reviews the application of consensus scoring for cases when the target 3D
structure is known. Comparing the performance of different methods is not a trivial task, and …

Virtual screening of molecular databases using a support vector machine

RN Jorissen, MK Gilson - Journal of chemical information and …, 2005 - ACS Publications
The Support Vector Machine (SVM) is an algorithm that derives a model used for the
classification of data into two categories and which has good generalization properties. This …