Evaluation guidelines for machine learning tools in the chemical sciences

A Bender, N Schneider, M Segler… - Nature Reviews …, 2022 - nature.com
Abstract Machine learning (ML) promises to tackle the grand challenges in chemistry and
speed up the generation, improvement and/or ordering of research hypotheses. Despite the …

Artificial intelligence and machine learning disciplines with the potential to improve the nanotoxicology and nanomedicine fields: a comprehensive review

AV Singh, M Varma, P Laux, S Choudhary… - Archives of …, 2023 - Springer
The use of nanomaterials in medicine depends largely on nanotoxicological evaluation in
order to ensure safe application on living organisms. Artificial intelligence (AI) and machine …

Explainable machine learning for property predictions in compound optimization: miniperspective

R Rodríguez-Pérez, J Bajorath - Journal of medicinal chemistry, 2021 - ACS Publications
The prediction of compound properties from chemical structure is a main task for machine
learning (ML) in medicinal chemistry. ML is often applied to large data sets in applications …

Recent advances in machine-learning-based chemoinformatics: a comprehensive review

SK Niazi, Z Mariam - International Journal of Molecular Sciences, 2023 - mdpi.com
In modern drug discovery, the combination of chemoinformatics and quantitative structure–
activity relationship (QSAR) modeling has emerged as a formidable alliance, enabling …

Guidance for good practice in the application of machine learning in development of toxicological quantitative structure-activity relationships (QSARs)

SJ Belfield, MTD Cronin, SJ Enoch, JW Firman - Plos one, 2023 - journals.plos.org
Recent years have seen a substantial growth in the adoption of machine learning
approaches for the purposes of quantitative structure-activity relationship (QSAR) …

[HTML][HTML] Machine learning for small molecule drug discovery in academia and industry

A Volkamer, S Riniker, E Nittinger, J Lanini… - Artificial Intelligence in …, 2023 - Elsevier
Academic and pharmaceutical industry research are both key for progresses in the field of
molecular machine learning. Despite common open research questions and long-term …

Benchmarking molecular feature attribution methods with activity cliffs

J Jiménez-Luna, M Skalic… - Journal of Chemical …, 2022 - ACS Publications
Feature attribution techniques are popular choices within the explainable artificial
intelligence toolbox, as they can help elucidate which parts of the provided inputs used by …

Machine learning in chemoinformatics and medicinal chemistry

R Rodríguez-Pérez, F Miljković… - Annual review of …, 2022 - annualreviews.org
In chemoinformatics and medicinal chemistry, machine learning has evolved into an
important approach. In recent years, increasing computational resources and new deep …

Exogenous Chemicals Impact Virus Receptor Gene Transcription: Insights from Deep Learning

X Liu, Y Guo, W Pan, Q Xue, J Fu, G Qu… - … Science & Technology, 2023 - ACS Publications
Despite the fact that coronavirus disease 2019 (COVID-19), caused by severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2), has been disrupting human life and …

Artificial intelligence and cheminformatics tools: a contribution to the drug development and chemical science

I Saifi, BA Bhat, SS Hamdani, UY Bhat… - Journal of …, 2023 - Taylor & Francis
In the ever-evolving field of drug discovery, the integration of Artificial Intelligence (AI) and
Machine Learning (ML) with cheminformatics has proven to be a powerful combination …