Recognizing pitfalls in virtual screening: a critical review

T Scior, A Bender, G Tresadern… - Journal of chemical …, 2012 - ACS Publications
The aim of virtual screening (VS) is to identify bioactive compounds through computational
means, by employing knowledge about the protein target (structure-based VS) or known …

Virtual screening techniques in drug discovery: review and recent applications

SFL da Silva Rocha, CG Olanda… - Current topics in …, 2019 - ingentaconnect.com
The discovery of bioactive molecules is an expensive and time-consuming process and new
strategies are continuously searched for in order to optimize this process. Virtual Screening …

How far can virtual screening take us in drug discovery?

S Kar, K Roy - Expert Opinion on Drug Discovery, 2013 - Taylor & Francis
Introduction: Virtual screening (VS) has emerged as an important tool in identifying bioactive
compounds through computational means, by employing knowledge about the protein target …

Benchmarking data sets for the evaluation of virtual ligand screening methods: review and perspectives

N Lagarde, JF Zagury, M Montes - Journal of chemical information …, 2015 - ACS Publications
Virtual screening methods are commonly used nowadays in drug discovery processes.
However, to ensure their reliability, they have to be carefully evaluated. The evaluation of …

[HTML][HTML] The light and dark sides of virtual screening: what is there to know?

A Gimeno, MJ Ojeda-Montes… - International journal of …, 2019 - mdpi.com
Virtual screening consists of using computational tools to predict potentially bioactive
compounds from files containing large libraries of small molecules. Virtual screening is …

Virtual screening in drug discovery-a computational perspective

AS Reddy, SP Pati, PP Kumar… - Current Protein and …, 2007 - ingentaconnect.com
Virtual screening emerged as an important tool in our quest to access novel drug like
compounds. There are a wide range of comparable and contrasting methodological …

Consideration of molecular weight during compound selection in virtual target-based database screening

Y Pan, N Huang, S Cho… - Journal of chemical …, 2003 - ACS Publications
Virtual database screening allows for millions of chemical compounds to be computationally
selected based on structural complimentarity to known inhibitors or to a target binding site …

Virtual screening in drug design and development

SF Sousa, N MFSA Cerqueira… - … chemistry & high …, 2010 - ingentaconnect.com
Virtual screening (VS) is presently a key component in the process of drug design and
development. VS is normally regarded as the selection of likely drug candidates from large …

Assessing different classification methods for virtual screening

D Plewczynski, SAH Spieser… - Journal of chemical …, 2006 - ACS Publications
How well do different classification methods perform in selecting the ligands of a protein
target out of large compound collections not used to train the model? Support vector …

In need of bias control: evaluating chemical data for machine learning in structure-based virtual screening

J Sieg, F Flachsenberg, M Rarey - Journal of chemical information …, 2019 - ACS Publications
Reports of successful applications of machine learning (ML) methods in structure-based
virtual screening (SBVS) are increasing. ML methods such as convolutional neural networks …