Flexibility in early drug discovery: focus on the beyond-Rule-of-5 chemical space

G Caron, V Digiesi, S Solaro, G Ermondi - Drug Discovery Today, 2020 - Elsevier
Highlights•NRot and Φ are flexibility indexes suitable for early drug discovery metrics.•In the
bRo5 chemical space NRot and Φ are not interchangeable.•In the presence of macrocycles …

Steering new drug discovery campaigns: permeability, solubility, and physicochemical properties in the bRo5 chemical space

G Caron, J Kihlberg, G Goetz, E Ratkova… - ACS Medicinal …, 2021 - ACS Publications
An increasing number of drug discovery programs concern compounds in the beyond rule of
5 (bRo5) chemical space, such as cyclic peptides, macrocycles, and degraders. Recent …

[PDF][PDF] Oral druggable space beyond the rule of 5: insights from drugs and clinical candidates

BC Doak, B Over, F Giordanetto, J Kihlberg - Chemistry & biology, 2014 - cell.com
The rule of 5 (Ro5) is a set of in silico guidelines applied to drug discovery to prioritize
compounds with an increased likelihood of high oral absorption. It has been influential in …

How beyond rule of 5 drugs and clinical candidates bind to their targets

BC Doak, J Zheng, D Dobritzsch… - Journal of medicinal …, 2016 - ACS Publications
To improve discovery of drugs for difficult targets, the opportunities of chemical space
beyond the rule of 5 (bRo5) were examined by retrospective analysis of a comprehensive …

3D molecular descriptors important for clinical success

DC Kombo, K Tallapragada, R Jain… - Journal of chemical …, 2013 - ACS Publications
The pharmacokinetic and safety profiles of clinical drug candidates are greatly influenced by
their requisite physicochemical properties. In particular, it has been shown that 2D molecular …

Rules were made to be broken

IV Hartung, BR Huck, A Crespo - Nature Reviews Chemistry, 2023 - nature.com
Twenty five years ago, Christopher Lipinski and colleagues published arguably the most
influential sentence in small-molecule drug discovery. Their cleverly crafted 'rule of 5'(Ro5) …

Beyond rotatable bond counts: capturing 3D conformational flexibility in a single descriptor

JGP Wicker, RI Cooper - Journal of Chemical Information and …, 2016 - ACS Publications
A new molecular descriptor, nConf20, based on chemical connectivity, is presented which
captures the accessible conformational space of a molecule. Currently the best available …

Are we opening the door to a new era of medicinal chemistry or being collapsed to a chemical singularity? Perspective

YA Ivanenkov, BA Zagribelnyy… - Journal of medicinal …, 2019 - ACS Publications
The paradigm of “drug-like-ness” dramatically altered the behavior of the medicinal
chemistry community for a long time. In recent years, scientists have empirically found a …

Assessing drug-likeness–what are we missing?

G Vistoli, A Pedretti, B Testa - Drug discovery today, 2008 - Elsevier
The concept of drug-likeness helps to optimise pharmacokinetic and pharmaceutical
properties, for example, solubility, chemical stability, bioavailability and distribution profile. A …

Rule of five in 2015 and beyond: Target and ligand structural limitations, ligand chemistry structure and drug discovery project decisions

CA Lipinski - Advanced drug delivery reviews, 2016 - Elsevier
The rule of five (Ro5), based on physicochemical profiles of phase II drugs, is consistent with
structural limitations in protein targets and the drug target ligands. Three of four parameters …