The AT-Hook motif as a versatile minor groove anchor for promoting DNA binding of transcription factor fragments
J Rodríguez, J Mosquera, JR Couceiro… - Chemical …, 2015 - pubs.rsc.org
We report the development of chimeric DNA binding peptides comprising a DNA binding
fragment of natural transcription factors (the basic region of a bZIP protein or a monomeric …
fragment of natural transcription factors (the basic region of a bZIP protein or a monomeric …
From transcription factors to designed sequence-specific DNA-binding peptides
ME Vázquez, AM Caamaño… - Chemical Society Reviews, 2003 - pubs.rsc.org
Transcription factors are DNA-binding proteins responsible for initiating the transcription of
particular genes upon interacting with specific DNA sequences located at their promoter or …
particular genes upon interacting with specific DNA sequences located at their promoter or …
Design and synthesis of a peptide that binds specific DNA sequences through simultaneous interaction in the major and in the minor groove
ME Vázquez, AM Caamaño… - Angewandte …, 2001 - Wiley Online Library
Most transcription factors (TFs) bind specific DNA sequences using dimeric or multimer
motifs, with more or less equal binding energy contributions from each domain and usually …
motifs, with more or less equal binding energy contributions from each domain and usually …
Recognition of nonpalindromic DNA sequence by a peptide heterodimer with artificial dimerization module
M Ueno, M Sawada, K Makino… - Journal of the American …, 1994 - ACS Publications
Sequence-specific DNA binding of the gene regulatory protein is often mediated by dimeric
species. Recent studies on the action of basic-helix-loop-helix and basic-leucine-zipper …
species. Recent studies on the action of basic-helix-loop-helix and basic-leucine-zipper …
An artificial six-zinc finger peptide with polyarginine linker: Selective binding to the discontinuous DNA sequences
M Imanishi, W Yan, T Morisaki, Y Sugiura - Biochemical and biophysical …, 2005 - Elsevier
Artificial DNA binding peptides recognizing separated sequences would expand varieties of
the target genes for desirable transcriptional control. Here we demonstrated that …
the target genes for desirable transcriptional control. Here we demonstrated that …
Stimuli-responsive selection of target DNA sequences by synthetic bZIP peptides
J Mosquera, A Jiménez-Balsa, VI Dodero… - Nature …, 2013 - nature.com
One of the strategies used by nature to regulate gene expression relies on the stimuli-
controlled combination of DNA-binding proteins. This in turn determines the target-binding …
controlled combination of DNA-binding proteins. This in turn determines the target-binding …
Sequence‐Selective DNA Recognition with Peptide–Bisbenzamidine Conjugates
Transcription factors (TFs) are specialized proteins that play a key role in the regulation of
genetic expression. Their mechanism of action involves the interaction with specific DNA …
genetic expression. Their mechanism of action involves the interaction with specific DNA …
Design of Artificial Transcriptional Activators with Rigid Poly-l-proline Linkers
PS Arora, AZ Ansari, TP Best, M Ptashne… - Journal of the …, 2002 - ACS Publications
Typical eukaryotic transcriptional activators are composed of distinct functional domains,
including a DNA binding domain and an activating domain. Artificial transcription factors …
including a DNA binding domain and an activating domain. Artificial transcription factors …
A designed DNA binding motif that recognizes extended sites and spans two adjacent major grooves
We report the rational design of a DNA-binding peptide construct composed of the DNA-
contacting regions of two transcription factors (GCN4 and GAGA) linked through an AT-hook …
contacting regions of two transcription factors (GCN4 and GAGA) linked through an AT-hook …
DNA recognition by synthetic constructs
The interaction of transcription factors with specific DNA sites is key for the regulation of
gene expression. Despite the availability of a large body of structural data on protein–DNA …
gene expression. Despite the availability of a large body of structural data on protein–DNA …