[HTML][HTML] Cultivar-dependent variation of the cotton rhizosphere and endosphere microbiome under field conditions

F Wei, L Zhao, X Xu, H Feng, Y Shi, G Deakin… - Frontiers in Plant …, 2019 - frontiersin.org
Verticillium wilt caused by Verticillium dahliae is a common soil-borne disease worldwide,
affecting many economically important crop species. Soil microbes can influence plant …

Detection and treatment of Candida auris in an outbreak situation: risk factors for developing colonization and candidemia by this new species in critically ill patients

A Ruiz-Gaitán, H Martínez, AM Moret… - Expert review of anti …, 2019 - Taylor & Francis
Background: Candida auris is an emerging, multidrug-resistant yeast causing hospital
outbreaks. This study describes the first 24 months of the ongoing C. auris outbreak in our …

Current practice in plankton metabarcoding: optimization and error management

LF Santoferrara - Journal of Plankton Research, 2019 - academic.oup.com
High-throughput sequencing of a targeted genetic marker is being widely used to analyze
biodiversity across taxa and environments. Amid a multitude of exciting findings, scientists …

Taxonomy and phylogeny of Postia.> Multi-gene phylogeny and taxonomy of the brown-rot fungi: Postia (Polyporales, Basidiomycota) and related genera

LL Shen, M Wang, JL Zhou, JH Xing… - … and Evolution of …, 2019 - ingentaconnect.com
Phylogenetic and taxonomic studies on the brown-rot fungi Postia and related genera, are
carried out. Phylogenies of these fungi are reconstructed with multiple loci DNA sequences …

[HTML][HTML] Fungal systematics and evolution: FUSE 5

J Song, JF Liang, M Mehrabi-Koushki… - Sydowia, 2019 - ncbi.nlm.nih.gov
Thirteen new species are formally described: Cortinarius brunneocarpus from Pakistan, C.
lilacinoarmillatus from India, Curvularia khuzestanica on Atriplex lentiformis from Iran …

[HTML][HTML] Temporal dynamics of the soil metabolome and microbiome during simulated anaerobic soil disinfestation

SS Hewavitharana, E Klarer, AJ Reed… - Frontiers in …, 2019 - frontiersin.org
Significant interest exists in engineering the soil microbiome to attain suppression of soil-
borne plant diseases. Anaerobic soil disinfestation (ASD) has potential as a biologically …

Mycosilver nanoparticles: Synthesis, characterization and its efficacy against plant pathogenic fungi

T Akther, S Hemalatha - BioNanoScience, 2019 - Springer
The fungicides used to control plant pathogenic fungi not only kill the fungi but also affect
other flora and fauna in the field. To preserve beneficial flora, novel strategies and …

Are fungi from adult orchid roots the best symbionts at germination? A case study

YY Meng, WL Zhang, MA Selosse, JY Gao - Mycorrhiza, 2019 - Springer
We studied mycobionts from advanced seedlings and adult mycorrhizal roots of the
terrestrial orchid Arundina graminifolia. Fungi were isolated, identified by ITS sequencing …

Effect of Trichoderma spp. on Fusarium wilt disease of tomato

NMA Sallam, AMI Eraky, A Sallam - Molecular Biology Reports, 2019 - Springer
Seven isolates of Trichoderma spp.(T1 to T7) from Egypt were evaluated in vitro by bioassay
for their potential to antagonize Fusarium oxysporum f. sp. lycopersici (FOL, the causal …

[HTML][HTML] Adapterama II: universal amplicon sequencing on Illumina platforms (TaggiMatrix)

TC Glenn, TW Pierson, NJ Bayona-Vásquez, TJ Kieran… - PeerJ, 2019 - peerj.com
Next-generation sequencing (NGS) of amplicons is used in a wide variety of contexts. In
many cases, NGS amplicon sequencing remains overly expensive and inflexible, with library …