An update on recent methods applied for deciphering the diversity of the noncoding RNA genome structure and function

S Spicuglia, MA Maqbool, D Puthier, JC Andrau - Methods, 2013 - Elsevier
The explosion of high throughput sequencing technologies marked a turn in our way of
understanding the complexity and diversity of the transcriptome, including noncoding …

Enhancers regulate polyadenylation site cleavage and control 3′ UTR isoform expression

B Kwon, MM Fansler, ND Patel, SH Lee, J Lee, W Ma… - bioRxiv, 2020 - biorxiv.org
Enhancers are DNA elements that increase gene expression. mRNA production is
determined by transcript production and polyadenylation site (PAS) cleavage activity. We …

Ceg1 depletion reveals mechanisms governing degradation of non-capped RNAs

O Zanin, D Hebenstreit, P Grzechnik - bioRxiv, 2022 - biorxiv.org
Most functional eukaryotic mRNAs contain a 7-methylguanosine (m7G) cap which serves as
a platform that recruits proteins to support essential biological functions such as mRNA …

From transcriptional complexity to cellular phenotypes: Lessons from yeast

V Pelechano - Yeast, 2017 - Wiley Online Library
Pervasive transcription has been reported in many eukaryotic organisms, revealing a highly
interleaved transcriptome organization that involves thousands of coding and non‐coding …

Identifying subunit organization and function of the nuclear RNA exosome machinery

J Losh - 2018 - digitalcommons.library.tmc.edu
Pontocerebellar hypoplasia (PCH) is a group of autosomal recessive disorders caused by
mutations in one of several genes (Table 3.1). Amino acid substitutions in EXOSC3, the …

Form and function of eukaryotic unstable non-coding RNAs.

J Houseley - Biochemical Society Transactions, 2012 - search.ebscohost.com
Unstable non-coding RNAs are produced from thousands of loci in all studied eukaryotes
(and also prokaryotes), but remain of largely unknown function. The present review …

[图书][B] Investigating the Function of the Yeast Rna Binding Protein Hrp1 in Rna Polymerase Ii Transcription Termination

EC Goguen - 2023 - search.proquest.com
Proteins that bind the nascent transcript exiting RNA polymerase II (RNAP II) can regulate
transcription elongation. The essential Saccharomyces cerevisiae hnRNP protein Hrp1 is …

Dis3-and exosome subunit-responsive 3′ mRNA instability elements

DL Kiss, D Hou, RH Gross, ED Andrulis - Biochemical and biophysical …, 2012 - Elsevier
Eukaryotic RNA turnover is regulated in part by the exosome, a nuclear and cytoplasmic
complex of ribonucleases (RNases) and RNA-binding proteins. The major RNase of the …

Approches bio-informatiques protéome-centrées pour l'étude des phénotypes complexes

SL Besse - 2023 - papyrus.bib.umontreal.ca
Parmi les différents acteurs impliqués dans le dogme de la biologie moléculaire, les
protéines sont des unités biologiques fonctionnelles contribuant à de nombreux processus …

[PDF][PDF] RNA-Mediated Regulation of Meiosis in Budding Yeast. Non-Coding RNA 2022, 8, 77

VV Pondugala, K Mishra - 2022 - academia.edu
Cells change their physiological state in response to environmental cues. In the absence of
nutrients, unicellular fungi such as budding yeast exit mitotic proliferation and enter the …