Circular RNA: metabolism, functions and interactions with proteins

WY Zhou, ZR Cai, J Liu, DS Wang, HQ Ju, RH Xu - Molecular cancer, 2020 - Springer
Abstract Circular RNAs (CircRNAs) are single-stranded, covalently closed RNA molecules
that are ubiquitous across species ranging from viruses to mammals. Important advances …

Mechanisms and functions of ribosome-associated protein quality control

CAP Joazeiro - Nature Reviews Molecular Cell Biology, 2019 - nature.com
The stalling of ribosomes during protein synthesis results in the production of truncated
polypeptides that can have deleterious effects on cells and therefore must be eliminated. In …

Engineered tRNAs suppress nonsense mutations in cells and in vivo

S Albers, EC Allen, N Bharti, M Davyt, D Joshi… - Nature, 2023 - nature.com
Nonsense mutations are the underlying cause of approximately 11% of all inherited genetic
diseases. Nonsense mutations convert a sense codon that is decoded by tRNA into a …

Single-cell Ribo-seq reveals cell cycle-dependent translational pausing

M VanInsberghe, J van den Berg, A Andersson-Rolf… - Nature, 2021 - nature.com
Single-cell sequencing methods have enabled in-depth analysis of the diversity of cell types
and cell states in a wide range of organisms. These tools focus predominantly on …

Translation dynamics in human cells visualized at high resolution reveal cancer drug action

H Xing, R Taniguchi, I Khusainov, JP Kreysing… - Science, 2023 - science.org
Ribosomes catalyze protein synthesis by cycling through various functional states. These
states have been extensively characterized in vitro, but their distribution in actively …

tRNA overexpression rescues peripheral neuropathy caused by mutations in tRNA synthetase

A Zuko, M Mallik, R Thompson, EL Spaulding… - Science, 2021 - science.org
Heterozygous mutations in six transfer RNA (tRNA) synthetase genes cause Charcot-Marie-
Tooth (CMT) peripheral neuropathy. CMT mutant tRNA synthetases inhibit protein synthesis …

Root of the tree: the significance, evolution, and origins of the ribosome

JC Bowman, AS Petrov, M Frenkel-Pinter… - Chemical …, 2020 - ACS Publications
The ribosome is an ancient molecular fossil that provides a telescope to the origins of life.
Made from RNA and protein, the ribosome translates mRNA to coded protein in all living …

Stop codon context influences genome-wide stimulation of termination codon readthrough by aminoglycosides

JR Wangen, R Green - Elife, 2020 - elifesciences.org
Stop codon readthrough (SCR) occurs when the ribosome miscodes at a stop codon. Such
readthrough events can be therapeutically desirable when a premature termination codon …

Noncoding translation mitigation

JS Kesner, Z Chen, P Shi, AO Aparicio, MR Murphy… - Nature, 2023 - nature.com
Translation is pervasive outside of canonical coding regions, occurring in long noncoding
RNAs, canonical untranslated regions and introns,,–, especially in ageing …

Ribosomal stress-surveillance: three pathways is a magic number

AC Vind, AV Genzor, S Bekker-Jensen - Nucleic acids research, 2020 - academic.oup.com
Cells rely on stress response pathways to uphold cellular homeostasis and limit the negative
effects of harmful environmental stimuli. The stress-and mitogen-activated protein (MAP) …