Impact of polyploidy on plant tolerance to abiotic and biotic stresses
VE Tossi, LJ Martínez Tosar, LE Laino… - Frontiers in Plant …, 2022 - frontiersin.org
Polyploidy, defined as the coexistence of three or more complete sets of chromosomes in an
organism's cells, is considered as a pivotal moving force in the evolutionary history of …
organism's cells, is considered as a pivotal moving force in the evolutionary history of …
Genomics of evolutionary novelty in hybrids and polyploids
G Nieto Feliner, J Casacuberta, JF Wendel - Frontiers in genetics, 2020 - frontiersin.org
It has long been recognized that hybridization and polyploidy are prominent processes in
plant evolution. Although classically recognized as significant in speciation and adaptation …
plant evolution. Although classically recognized as significant in speciation and adaptation …
Dynamic genome evolution in a model fern
The large size and complexity of most fern genomes have hampered efforts to elucidate
fundamental aspects of fern biology and land plant evolution through genome-enabled …
fundamental aspects of fern biology and land plant evolution through genome-enabled …
Chromosome-level genome assembly of bunching onion illuminates genome evolution and flavor formation in Allium crops
N Liao, Z Hu, J Miao, X Hu, X Lyu, H Fang… - Nature …, 2022 - nature.com
The Allium genus is cultivated globally as vegetables, condiments, or medicinal plants and
is characterized by large genomes and strong pungency. However, the genome evolution …
is characterized by large genomes and strong pungency. However, the genome evolution …
An improved de novo assembly and annotation of the tomato reference genome using single-molecule sequencing, Hi-C proximity ligation and optical maps
The original Heinz 1706 reference genome was produced by a large team of scientists from
across the globe from a variety of input sources that included 454 sequences in addition to …
across the globe from a variety of input sources that included 454 sequences in addition to …
Genomic impact of stress-induced transposable element mobility in Arabidopsis
Transposable elements (TEs) have long been known to be major contributors to plant
evolution, adaptation and crop domestication. Stress-induced TE mobilization is of particular …
evolution, adaptation and crop domestication. Stress-induced TE mobilization is of particular …
The dynamism of transposon methylation for plant development and stress adaptation
Plant development processes are regulated by epigenetic alterations that shape nuclear
structure, gene expression, and phenotypic plasticity; these alterations can provide the plant …
structure, gene expression, and phenotypic plasticity; these alterations can provide the plant …
Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification
Background Plant LTR-retrotransposons are classified into two superfamilies, Ty1/copia and
Ty3/gypsy. They are further divided into an enormous number of families which are, due to …
Ty3/gypsy. They are further divided into an enormous number of families which are, due to …
Plant biosynthetic gene clusters in the context of metabolic evolution
SJ Smit, BR Lichman - Natural Product Reports, 2022 - pubs.rsc.org
Covering: up to 2022 Plants produce a wide range of structurally and biosynthetically
diverse natural products to interact with their environment. These specialised metabolites …
diverse natural products to interact with their environment. These specialised metabolites …
Retrotransposons in plant genomes: structure, identification, and classification through bioinformatics and machine learning
Transposable elements (TEs) are genomic units able to move within the genome of virtually
all organisms. Due to their natural repetitive numbers and their high structural diversity, the …
all organisms. Due to their natural repetitive numbers and their high structural diversity, the …