The value of reference genomes in the conservation of threatened species

P Brandies, E Peel, CJ Hogg, K Belov - Genes, 2019 - mdpi.com
Conservation initiatives are now more crucial than ever—over a million plant and animal
species are at risk of extinction over the coming decades. The genetic management of …

[HTML][HTML] Diverse mechanisms of centromere specification

BG Mellone, D Fachinetti - Current Biology, 2021 - cell.com
The centromere performs a universally conserved function, to accurately partition genetic
information upon cell division. Yet, centromeres are among the most rapidly evolving …

From telomere to telomere: The transcriptional and epigenetic state of human repeat elements

SJ Hoyt, JM Storer, GA Hartley, PGS Grady… - Science, 2022 - science.org
Mobile elements and repetitive genomic regions are sources of lineage-specific genomic
innovation and uniquely fingerprint individual genomes. Comprehensive analyses of such …

The inflated significance of neutral genetic diversity in conservation genetics

JC Teixeira, CD Huber - Proceedings of the National …, 2021 - National Acad Sciences
The current rate of species extinction is rapidly approaching unprecedented highs, and life
on Earth presently faces a sixth mass extinction event driven by anthropogenic activity …

Incomplete lineage sorting and phenotypic evolution in marsupials

S Feng, M Bai, I Rivas-González, C Li, S Liu, Y Tong… - Cell, 2022 - cell.com
Incomplete lineage sorting (ILS) makes ancestral genetic polymorphisms persist during
rapid speciation events, inducing incongruences between gene trees and species trees. ILS …

[HTML][HTML] Platypus and echidna genomes reveal mammalian biology and evolution

Y Zhou, L Shearwin-Whyatt, J Li, Z Song, T Hayakawa… - Nature, 2021 - nature.com
Egg-laying mammals (monotremes) are the only extant mammalian outgroup to therians
(marsupial and eutherian animals) and provide key insights into mammalian evolution 1, 2 …

The evolution of two transmissible cancers in Tasmanian devils

MR Stammnitz, K Gori, YM Kwon, E Harry, FJ Martin… - Science, 2023 - science.org
Tasmanian devils have spawned two transmissible cancer lineages, named devil facial
tumor 1 (DFT1) and devil facial tumor 2 (DFT2). We investigated the genetic diversity and …

Islands of retroelements are major components of Drosophila centromeres

CH Chang, A Chavan, J Palladino, X Wei… - PLoS …, 2019 - journals.plos.org
Centromeres are essential chromosomal regions that mediate kinetochore assembly and
spindle attachments during cell division. Despite their functional conservation, centromeres …

Centromere repeats: hidden gems of the genome

G Hartley, RJ O'Neill - Genes, 2019 - mdpi.com
Satellite DNAs are now regarded as powerful and active contributors to genomic and
chromosomal evolution. Paired with mobile transposable elements, these repetitive …

A practical introduction to sequentially Markovian coalescent methods for estimating demographic history from genomic data

N Mather, SM Traves, SYW Ho - Ecology and evolution, 2020 - Wiley Online Library
A common goal of population genomics and molecular ecology is to reconstruct the
demographic history of a species of interest. A pair of powerful tools based on the …