An integrated view of quantitative trait variation using tomato interspecific introgression lines

ZB Lippman, Y Semel, D Zamir - Current opinion in genetics & …, 2007 - Elsevier
Resolving natural phenotypic variation into genetic and molecular components is a major
objective in biology. Over the past decade, tomato interspecific introgression lines (ILs) …

Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data

H Redestig, A Fukushima, H Stenlund, T Moritz… - Analytical …, 2009 - ACS Publications
Most mass spectrometry based metabolomics studies are semiquantitative and depend on
efficient normalization techniques to suppress systematic error. A common approach is to …

[PDF][PDF] 4 Marker-assisted selection as a component of conventional plant breeding

PK Gupta, J Kumar, RR Mir, A Kumar - Plant breeding reviews, 2010 - academia.edu
CMS Cytoplasmic male sterility COS Conserved orthologous set DArT Diversity array
technology eQTL Expression QTL ESTs Expressed sequence tags FM Functional markers …

Metabolic networks: how to identify key components in the regulation of metabolism and growth

M Stitt, R Sulpice, J Keurentjes - Plant physiology, 2010 - academic.oup.com
Plants display enormous diversity in their metabolism. Although the biosynthesis and
function of the myriad plant metabolites have been studied for decades, we have little …

Metabolomic prediction of yield in hybrid rice

S Xu, Y Xu, L Gong, Q Zhang - The Plant Journal, 2016 - Wiley Online Library
Rice (Oryza sativa) provides a staple food source for more than 50% of the world's
population. An increase in yield can significantly contribute to global food security. Hybrid …

Identification of drought tolerance markers in a diverse population of rice cultivars by expression and metabolite profiling

T Degenkolbe, PT Do, J Kopka, E Zuther, DK Hincha… - PLoS …, 2013 - journals.plos.org
Rice provides about half of the calories consumed in Asian countries, but its productivity is
often reduced by drought, especially when grown under rain-fed conditions. Cultivars with …

Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis

U Bechtold, CA Penfold, DJ Jenkins, R Legaie… - The Plant …, 2016 - academic.oup.com
In Arabidopsis thaliana, changes in metabolism and gene expression drive increased
drought tolerance and initiate diverse drought avoidance and escape responses. To …

Correlation‐based network generation, visualization, and analysis as a powerful tool in biological studies: A case study in cancer cell metabolism

A Batushansky, D Toubiana… - BioMed research …, 2016 - Wiley Online Library
In the last decade vast data sets are being generated in biological and medical studies. The
challenge lies in their summary, complexity reduction, and interpretation. Correlation‐based …

Metabolomics: the chemistry between ecology and genetics

M Macel, NM Van Dam… - Molecular ecology …, 2010 - Wiley Online Library
Metabolomics is a fast developing field of comprehensive untargeted chemical analyses. It
has many applications and can in principle be used on any organism without prior …

Molecular and cellular approaches for the detection of protein–protein interactions: latest techniques and current limitations

S Lalonde, DW Ehrhardt, D Loqué, J Chen… - The Plant …, 2008 - Wiley Online Library
Homotypic and heterotypic protein interactions are crucial for all levels of cellular function,
including architecture, regulation, metabolism, and signaling. Therefore, protein interaction …