Patterns in soil microbial diversity across Europe

M Labouyrie, C Ballabio, F Romero, P Panagos… - Nature …, 2023 - nature.com
Factors driving microbial community composition and diversity are well established but the
relationship with microbial functioning is poorly understood, especially at large scales. We …

Soil mycobiome in sustainable agriculture

M Frąc, ES Hannula, M Bełka, JF Salles… - Frontiers in …, 2022 - frontiersin.org
The soil microbiome contributes to several ecosystem processes. It plays a key role in
sustainable agriculture, horticulture and forestry. In contrast to the vast number of studies …

A Galaxy of informatics resources for MS-based proteomics

S Mehta, M Bernt, M Chambers, M Fahrner… - Expert Review of …, 2023 - Taylor & Francis
Introduction Continuous advances in mass spectrometry (MS) technologies have enabled
deeper and more reproducible proteome characterization and a better understanding of …

Effects of pyrene on the structure and metabolic function of soil microbial communities

L Zhang, M Yi, P Lu - Environmental Pollution, 2022 - Elsevier
The widely detected pyrene (PYR) is prone to accumulate and pose risks to the soil
ecosystem. In this study, an aerobic closed microcosm was constructed to assess the effects …

Spinach (Spinacia oleracea) as green manure modifies the soil nutrients and microbiota structure for enhanced pepper productivity

RH Kim, SB Tagele, M Jeong, DR Jung, D Lee… - Scientific Reports, 2023 - nature.com
Spinach has been suggested as a potential rotation crop for increasing crop yield by
enhancing beneficial fungal microbes in continuous monocropping. However, no research …

Biomarker metaproteomics for relative taxa abundances across soil organisms

R Starke, AM Fiore-Donno, RA White III… - Soil Biology and …, 2022 - Elsevier
Soil organisms are often classified using methods targeting individual groups of taxa (eg,
bacteria, fungi and invertebrates), which hampers our ability to directly compare the relative …

Omics-based ecosurveillance for the assessment of ecosystem function, health, and resilience

DJ Beale, OAH Jones, U Bose… - Emerging topics in …, 2022 - portlandpress.com
Current environmental monitoring efforts often focus on known, regulated contaminants
ignoring the potential effects of unmeasured compounds and/or environmental factors …

Chytrids in soil environments: Unique adaptations and distributions

DG Hanrahan-Tan, O Lilje, L Henderson - Encyclopedia, 2023 - mdpi.com
Chytridiomycota (zoosporic true fungi) have a consistent presence in soils and have been
frequently identified within many diverse terrestrial environments. However, Chytridiomycota …

Changes in the mycobiome structure in response to reduced nitrogen fertilization in two cropping systems of maize

A Kruczyńska, A Kuźniar, A Banach, S Jurczyk… - Science of the Total …, 2023 - Elsevier
Nitrogen (N) is an essential element for plant productivity; hence, it is abundantly applied to
the soil in the form of organic or chemical fertilizers, which consequently have a negative …

Enzymatic machinery of wood-inhabiting fungi that degrade temperate tree species

L Kipping, N Jehmlich, J Moll, M Noll… - The ISME …, 2024 - academic.oup.com
Deadwood provides habitat for fungi and serves diverse ecological functions in forests. We
already have profound knowledge of fungal assembly processes, physiological and …