Genome downsizing after polyploidy: mechanisms, rates and selection pressures

X Wang, JA Morton, J Pellicer, IJ Leitch… - The Plant …, 2021 - Wiley Online Library
An analysis of over 10 000 plant genome sizes (GSs) indicates that most species have
smaller genomes than expected given the incidence of polyploidy in their ancestries …

Genome downsizing in polyploid plants

IJ Leitch, MD Bennett - Biological journal of the Linnean Society, 2004 - academic.oup.com
All else being equal, polyploids are expected to have larger C-values (amount of DNA in the
unreplicated gametic nucleus) than their diploid progenitors, increasing in direct proportion …

Polyploidy and genome evolution in plants

KL Adams, JF Wendel - Current opinion in plant biology, 2005 - Elsevier
Genome doubling (polyploidy) has been and continues to be a pervasive force in plant
evolution. Modern plant genomes harbor evidence of multiple rounds of past …

Polyploidy and genome evolution in plants

PS Soltis, DB Marchant, Y Van de Peer… - Current opinion in …, 2015 - Elsevier
Plant genomes vary in size and complexity, fueled in part by processes of whole-genome
duplication (WGD; polyploidy) and subsequent genome evolution. Despite repeated …

The long and short of doubling down: polyploidy, epigenetics, and the temporal dynamics of genome fractionation

JF Wendel, D Lisch, G Hu, AS Mason - Current opinion in genetics & …, 2018 - Elsevier
We consider the rapidly advancing discipline of plant evolutionary genomics, with a focus on
the evolution of polyploid genomes. In many lineages, polyploidy is followed by 'biased …

Genome stability and evolution: attempting a holistic view

I Schubert, GTH Vu - Trends in plant science, 2016 - cell.com
The reason why the DNA content, chromosome number and shape, and gene content of
eukaryotic genomes vary independently remains a matter of speculation. The same is true …

Fractionation mutagenesis and similar consequences of mechanisms removing dispensable or less-expressed DNA in plants

M Freeling, MR Woodhouse, S Subramaniam… - Current opinion in plant …, 2012 - Elsevier
Unlike in mammals, plants rapidly delete functionless, nonrepetitive DNA from their
genomes. Following paleopolyploidies, duplicate genes are deleted by intrachromosomal …

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

X Qiao, Q Li, H Yin, K Qi, L Li, R Wang, S Zhang… - Genome biology, 2019 - Springer
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …

Dosage, duplication, and diploidization: clarifying the interplay of multiple models for duplicate gene evolution over time

GC Conant, JA Birchler, JC Pires - Current opinion in plant biology, 2014 - Elsevier
Highlights•Dosage balance is fluid and will change over time.•Duplicate genes are
preserved by interplay of multiple overlapping mechanisms.•Distinguishing duplicate gene …

[HTML][HTML] Rapid, repeated, and clustered loss of duplicate genes in allopolyploid plant populations of independent origin

RJA Buggs, S Chamala, W Wu, JA Tate, PS Schnable… - Current biology, 2012 - cell.com
The predictability of evolution is debatable, with recent evidence suggesting that outcomes
may be constrained by gene interaction networks [1]. Whole-genome duplication (WGD; …