[HTML][HTML] Multi-omics approaches to disease

Y Hasin, M Seldin, A Lusis - Genome biology, 2017 - Springer
High-throughput technologies have revolutionized medical research. The advent of
genotyping arrays enabled large-scale genome-wide association studies and methods for …

Multi-omics integration in biomedical research–A metabolomics-centric review

MA Wörheide, J Krumsiek, G Kastenmüller… - Analytica chimica …, 2021 - Elsevier
Recent advances in high-throughput technologies have enabled the profiling of multiple
layers of a biological system, including DNA sequence data (genomics), RNA expression …

Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations

JZ Liu, S Van Sommeren, H Huang, SC Ng, R Alberts… - Nature …, 2015 - nature.com
Ulcerative colitis and Crohn's disease are the two main forms of inflammatory bowel disease
(IBD). Here we report the first trans-ancestry association study of IBD, with genome-wide or …

HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease

LD Ward, M Kellis - Nucleic acids research, 2016 - academic.oup.com
More than 90% of common variants associated with complex traits do not affect proteins
directly, but instead the circuits that control gene expression. This has increased the urgency …

[PDF][PDF] Environment drives selection and function of enhancers controlling tissue-specific macrophage identities

D Gosselin, VM Link, CE Romanoski, GJ Fonseca… - Cell, 2014 - cell.com
Macrophages reside in essentially all tissues of the body and play key roles in innate and
adaptive immune responses. Distinct populations of tissue macrophages also acquire …

[HTML][HTML] The role of regulatory variation in complex traits and disease

FW Albert, L Kruglyak - Nature Reviews Genetics, 2015 - nature.com
We are in a phase of unprecedented progress in identifying genetic loci that cause variation
in traits ranging from growth and fitness in simple organisms to disease in humans …

Non-coding RNAs in cardiovascular diseases: diagnostic and therapeutic perspectives

W Poller, S Dimmeler, S Heymans, T Zeller… - European heart …, 2018 - academic.oup.com
Recent research has demonstrated that the non-coding genome plays a key role in genetic
programming and gene regulation during development as well as in health and …

[PDF][PDF] Common disease is more complex than implied by the core gene omnigenic model

NR Wray, C Wijmenga, PF Sullivan, J Yang… - Cell, 2018 - cell.com
The evidence that most adult-onset common diseases have a polygenic genetic architecture
fully consistent with robust biological systems supported by multiple back-up mechanisms is …

Omics sciences for systems biology in Alzheimer's disease: State-of-the-art of the evidence

H Hampel, R Nisticò, NT Seyfried, AI Levey… - Ageing Research …, 2021 - Elsevier
Alzheimer's disease (AD) is characterized by non-linear, genetic-driven pathophysiological
dynamics with high heterogeneity in biological alterations and disease spatial-temporal …

Network approaches to systems biology analysis of complex disease: integrative methods for multi-omics data

J Yan, SL Risacher, L Shen… - Briefings in bioinformatics, 2018 - academic.oup.com
In the past decade, significant progress has been made in complex disease research across
multiple omics layers from genome, transcriptome and proteome to metabolome. There is an …