From DNA to protein: Why genetic code context of nucleotides for DNA signal processing? A review

M Ahmad, LT Jung, AA Bhuiyan - Biomedical Signal Processing and …, 2017 - Elsevier
Protein coding regions are commonly diffused with non-coding regions due to 1/f
background noise in such a way that a viable discernment between the two regions …

Survey on encoding schemes for genomic data representation and feature learning—from signal processing to machine learning

N Yu, Z Li, Z Yu - Big Data Mining and Analytics, 2018 - ieeexplore.ieee.org
Data-driven machine learning, especially deep learning technology, is becoming an
important tool for handling big data issues in bioinformatics. In machine learning, DNA …

Gene mutation detection for breast cancer disease: A review

UN Wisesty, TR Mengko… - IOP Conference Series …, 2020 - iopscience.iop.org
Breast cancer is one of the most common diseases suffered, especially by women, in the
world, and about two billion new cases of patients with breast cancer in 2018. Therefore, it is …

A novel numerical mapping method based on entropy for digitizing DNA sequences

B Das, I Turkoglu - Neural Computing and Applications, 2018 - Springer
Recently, digital signal processing has been widely applied in the study of genomics. One of
the genomic studies is identification of protein-coding regions. Where is a protein coded …

Filter-based methodology for the location of hot spots in proteins and exons in DNA

P Ramachandran, WS Lu… - IEEE Transactions on …, 2012 - ieeexplore.ieee.org
The so-called receiver operating characteristic technique is used as a tool in an optimization
procedure for the improvement and assessment of a filter-based methodology for the …

Digital signal processing in the analysis of genomic sequences

JV Lorenzo-Ginori, A Rodríguez-Fuentes… - Current …, 2009 - ingentaconnect.com
Digital Signal Processing (DSP) applications in Bioinformatics have received great attention
in recent years, where new effective methods for genomic sequence analysis, such as the …

Identification of protein coding regions using antinotch filters

MK Hota, VK Srivastava - Digital signal processing, 2012 - Elsevier
A major area of research in genomic sequence analysis is the identification of protein coding
regions using the period-3 property. Previously antinotch filter has been used for this …

Localizing triplet periodicity in DNA and cDNA sequences

L Wang, LD Stein - BMC bioinformatics, 2010 - Springer
Background The protein-coding regions (coding exons) of a DNA sequence exhibit a triplet
periodicity (TP) due to fact that coding exons contain a series of three nucleotide codons that …

A biological inspired fuzzy adaptive window median filter (FAWMF) for enhancing DNA signal processing

M Ahmad, LT Jung, AA Bhuiyan - Computer methods and programs in …, 2017 - Elsevier
Abstract Background and Objective Digital signal processing techniques commonly employ
fixed length window filters to process the signal contents. DNA signals differ in …

[PDF][PDF] Study of DNA sequence analysis using DSP techniques

TM Inbamalar, R Sivakumar - … of Automation and Control Engineering Vol, 2013 - joace.org
Recently there are greater advances in bioinformatics and genomic signal processing.
Digital Signal Processing (DSP) applications in genomic sequence analysis have received …