[HTML][HTML] The relationship between the gut microbiome and host gene expression: a review

RG Nichols, ER Davenport - Human genetics, 2021 - Springer
Despite the growing knowledge surrounding host–microbiome interactions, we are just
beginning to understand how the gut microbiome influences—and is influenced by—host …

[HTML][HTML] Regulatory innate lymphoid cells control innate intestinal inflammation

S Wang, P Xia, Y Chen, Y Qu, Z Xiong, B Ye, Y Du… - Cell, 2017 - cell.com
An emerging family of innate lymphoid cells (termed ILCs) has an essential role in the
initiation and regulation of inflammation. However, it is still unclear how ILCs are regulated …

Single-cell mapping of the thymic stroma identifies IL-25-producing tuft epithelial cells

C Bornstein, S Nevo, A Giladi, N Kadouri, M Pouzolles… - Nature, 2018 - nature.com
T cell development and selection are coordinated in the thymus by a specialized niche of
diverse stromal populations,–. Although much progress has been made over the years in …

[HTML][HTML] Tissue-specific features of innate lymphoid cells

I Meininger, A Carrasco, A Rao, T Soini, E Kokkinou… - Trends in …, 2020 - cell.com
Although the function of the circulating immune cell compartment has been studied in detail
for decades, limitations in terms of access and cell yields from peripheral tissues have …

Gut microbiota in ulcerative colitis: insights on pathogenesis and treatment

XY Guo, XJ Liu, JY Hao - Journal of digestive diseases, 2020 - Wiley Online Library
Gut microbiota constitute the largest reservoir of the human microbiome and are an
abundant and stable ecosystem—based on its diversity, complexity, redundancy, and host …

[HTML][HTML] Tissue-specific transcriptional imprinting and heterogeneity in human innate lymphoid cells revealed by full-length single-cell RNA-sequencing

L Mazzurana, P Czarnewski, V Jonsson, L Wigge… - Cell research, 2021 - nature.com
The impact of the microenvironment on innate lymphoid cell (ILC)-mediated immunity in
humans remains largely unknown. Here we used full-length Smart-seq2 single-cell RNA …

Microbiome-modulated metabolites at the interface of host immunity

E Blacher, M Levy, E Tatirovsky… - The Journal of …, 2017 - journals.aai.org
The mammalian gastrointestinal tract and associated mucosal immune system harbor a
large repertoire of metabolites of prokaryotic and eukaryotic origin that play important roles …

[HTML][HTML] Bile acid–gut microbiota axis in inflammatory bowel disease: from bench to bedside

M Yang, Y Gu, L Li, T Liu, X Song, Y Sun, X Cao… - Nutrients, 2021 - mdpi.com
Inflammatory bowel disease (IBD) is a chronic, relapsing inflammatory disorder of the
gastrointestinal tract, with increasing prevalence, and its pathogenesis remains unclear …

[HTML][HTML] Metabolic programs tailor T cell immunity in viral infection, cancer, and aging

SH Møller, PC Hsueh, YR Yu, L Zhang, PC Ho - Cell metabolism, 2022 - cell.com
Productive T cell responses to infection and cancer rely on coordinated metabolic
reprogramming and epigenetic remodeling among the immune cells. In particular, T cell …

[HTML][HTML] Neonatal gut microbiome and immunity

KZ Sanidad, MY Zeng - Current opinion in microbiology, 2020 - Elsevier
Highlights•In utero microbial stimulation modulates both prenatal and postnatal immune cell
development.•Unique neonatal gut microenvironment allows for progressive colonization of …