[HTML][HTML] Development and validation of an integrative methylation signature and nomogram for predicting survival in clear cell renal cell carcinoma
Q Peng, Y Zhou, L Jin, C Cao, C Gao… - Translational …, 2020 - ncbi.nlm.nih.gov
Background Growing evidence has shown that genetic or epigenetic alterations are highly
involved in the initiation and progression of renal cell carcinoma (RCC). This study aimed to …
involved in the initiation and progression of renal cell carcinoma (RCC). This study aimed to …
Clinical Utility and Benefits of Comprehensive Genomic Profiling in Cancer
MY Tjota, JP Segal, P Wang - The Journal of Applied Laboratory …, 2024 - academic.oup.com
Background Comprehensive genomic profiling (CGP) with next-generation sequencing
detects genetic alterations of hundreds of genes simultaneously and multiple molecular …
detects genetic alterations of hundreds of genes simultaneously and multiple molecular …
Computational investigations into structure and function impact of novel mutations identified in targeted exons from ovarian cancer cell lines: Damaging mutations in …
The lack of sensitive and specific biomarkers for ovarian cancer leads to late stage
diagnosis of the disease in a majority of the cases. Mutation accumulation is the basis for …
diagnosis of the disease in a majority of the cases. Mutation accumulation is the basis for …
Multiobjective optimization identifies cancer-selective combination therapies
Combinatorial therapies are required to treat patients with advanced cancers that have
become resistant to monotherapies through rewiring of redundant pathways. Due to a …
become resistant to monotherapies through rewiring of redundant pathways. Due to a …
Unveiling the interplay between mutational signatures and tumor microenvironment: a pan-cancer analysis
LZ Luo, S Li, C Wei, J Ma, LM Qian, YX Chen… - Frontiers in …, 2023 - frontiersin.org
Background While recent studies have separately explored mutational signatures and the
tumor microenvironment (TME), there is limited research on the associations of both factors …
tumor microenvironment (TME), there is limited research on the associations of both factors …
DNA repair footprint uncovers contribution of DNA repair mechanism to mutational signatures
Cancer genomes accumulate a large number of somatic mutations resulting from
imperfection of DNA processing during normal cell cycle as well as from carcinogenic …
imperfection of DNA processing during normal cell cycle as well as from carcinogenic …
A selection-based next generation sequencing approach to develop robust, genotype-specific mutation profiles in Saccharomyces cerevisiae
Distinct mutation signatures arise from environmental exposures and/or from defects in
metabolic pathways that promote genome stability. The presence of a particular mutation …
metabolic pathways that promote genome stability. The presence of a particular mutation …
Mutational signature dynamics shaping the evolution of oesophageal adenocarcinoma
A variety of mutational processes drive cancer development, but their dynamics across the
entire disease spectrum from pre-cancerous to advanced neoplasia are poorly understood …
entire disease spectrum from pre-cancerous to advanced neoplasia are poorly understood …
ScalpelSig Designs Targeted Genomic Panels from Data to Detect Activity of Mutational Signatures
Over the past decade, a promising line of cancer research has utilized machine learning to
mine statistical patterns of mutations in cancer genomes for information. Recent work shows …
mine statistical patterns of mutations in cancer genomes for information. Recent work shows …
Mutational signatures driven by epigenetic determinants enable the stratification of patients with gastric cancer for therapeutic intervention
JR Buttura, MN Provisor Santos, R Valieris… - Cancers, 2021 - mdpi.com
Simple Summary Mutational signatures due to DNA mismatch repair deficiency (dMMR) is
common in many cancers. However, the prognostic value of dMMR-associated mutational …
common in many cancers. However, the prognostic value of dMMR-associated mutational …