Rapid identification of potential inhibitors of SARS‐CoV‐2 main protease by deep docking of 1.3 billion compounds
Abstract The recently emerged 2019 Novel Coronavirus (SARS‐CoV‐2) and associated
COVID‐19 disease cause serious or even fatal respiratory tract infection and yet no …
COVID‐19 disease cause serious or even fatal respiratory tract infection and yet no …
Concepts of artificial intelligence for computer-assisted drug discovery
X Yang, Y Wang, R Byrne, G Schneider… - Chemical …, 2019 - ACS Publications
Artificial intelligence (AI), and, in particular, deep learning as a subcategory of AI, provides
opportunities for the discovery and development of innovative drugs. Various machine …
opportunities for the discovery and development of innovative drugs. Various machine …
An open-source drug discovery platform enables ultra-large virtual screens
On average, an approved drug currently costs US $2–3 billion and takes more than 10 years
to develop. In part, this is due to expensive and time-consuming wet-laboratory experiments …
to develop. In part, this is due to expensive and time-consuming wet-laboratory experiments …
Transfer learning for drug discovery
C Cai, S Wang, Y Xu, W Zhang, K Tang… - Journal of Medicinal …, 2020 - ACS Publications
The data sets available to train models for in silico drug discovery efforts are often small.
Indeed, the sparse availability of labeled data is a major barrier to artificial-intelligence …
Indeed, the sparse availability of labeled data is a major barrier to artificial-intelligence …
ScanNet: an interpretable geometric deep learning model for structure-based protein binding site prediction
Predicting the functional sites of a protein from its structure, such as the binding sites of small
molecules, other proteins or antibodies, sheds light on its function in vivo. Currently, two …
molecules, other proteins or antibodies, sheds light on its function in vivo. Currently, two …
Key topics in molecular docking for drug design
PHM Torres, ACR Sodero, P Jofily… - International journal of …, 2019 - mdpi.com
Molecular docking has been widely employed as a fast and inexpensive technique in the
past decades, both in academic and industrial settings. Although this discipline has now had …
past decades, both in academic and industrial settings. Although this discipline has now had …
Boosting protein–ligand binding pose prediction and virtual screening based on residue–atom distance likelihood potential and graph transformer
The past few years have witnessed enormous progress toward applying machine learning
approaches to the development of protein–ligand scoring functions. However, the robust …
approaches to the development of protein–ligand scoring functions. However, the robust …
Artificial intelligence and machine learning‐aided drug discovery in central nervous system diseases: State‐of‐the‐arts and future directions
Neurological disorders significantly outnumber diseases in other therapeutic areas.
However, developing drugs for central nervous system (CNS) disorders remains the most …
However, developing drugs for central nervous system (CNS) disorders remains the most …
Generating 3D molecules conditional on receptor binding sites with deep generative models
The goal of structure-based drug discovery is to find small molecules that bind to a given
target protein. Deep learning has been used to generate drug-like molecules with certain …
target protein. Deep learning has been used to generate drug-like molecules with certain …
Machine learning on graphs: A model and comprehensive taxonomy
There has been a surge of recent interest in graph representation learning (GRL). GRL
methods have generally fallen into three main categories, based on the availability of …
methods have generally fallen into three main categories, based on the availability of …