Novel propargylamine-based inhibitors of cholinesterases and monoamine oxidases: Synthesis, biological evaluation and docking study
M Krátký, QA Vu, Š Štěpánková, A Maruca, TB Silva… - Bioorganic …, 2021 - Elsevier
A combination of several pharmacophores in one molecule has been successfully used for
multi-target-directed ligands (MTDL) design. New propargylamine substituted derivatives …
multi-target-directed ligands (MTDL) design. New propargylamine substituted derivatives …
Chromenone derivatives as a versatile scaffold with dual mode of inhibition of HIV-1 reverse transcriptase-associated Ribonuclease H function and integrase activity
F Esposito, FA Ambrosio, R Maleddu, G Costa… - European Journal of …, 2019 - Elsevier
A number of compounds targeting different processes of the Human Immunodeficiency Virus
type 1 (HIV-1) life cycle have been developed in the continuing fight against AIDS. Coumarin …
type 1 (HIV-1) life cycle have been developed in the continuing fight against AIDS. Coumarin …
[HTML][HTML] A novel phenylpyrrolidine derivative: synthesis and effect on cognitive functions in rats with experimental ishemic stroke
DA Borozdenko, AA Ezdoglian, TA Shmigol… - Molecules, 2021 - mdpi.com
We performed an in silico, in vitro, and in vivo assessment of a potassium 2-[2-(2-oxo-4-
phenylpyrrolidin-1-yl) acetamido] ethanesulfonate (compound 1) as a potential prodrug for …
phenylpyrrolidin-1-yl) acetamido] ethanesulfonate (compound 1) as a potential prodrug for …
[HTML][HTML] Zika virus NS4A cytosolic region (residues 1–48) is an intrinsically disordered domain and folds upon binding to lipids
In flaviviruses, the NS4A is an integral transmembrane protein that contributes to form virus-
induced membrane curvature. However, structural features of NS4A are not documented in …
induced membrane curvature. However, structural features of NS4A are not documented in …
[HTML][HTML] A machine learning based intramolecular potential for a flexible organic molecule
Quantum mechanical predictive modelling in chemistry and biology is often hindered by the
long time scales and large system sizes required of the computational model. Here, we …
long time scales and large system sizes required of the computational model. Here, we …
[HTML][HTML] Microbe-Derived Indole Metabolite Demonstrates Potent Multidrug Efflux Pump Inhibition in Staphylococcus aureus
Efflux pumps are always at the forefront of bacterial multidrug resistance and account for the
failure of antibiotics. The present study explored the potential of 2-(2-Aminophenyl) indole …
failure of antibiotics. The present study explored the potential of 2-(2-Aminophenyl) indole …
[HTML][HTML] Proteomics-based vaccine targets annotation and design of multi-epitope vaccine against antibiotic-resistant Streptococcus gallolyticus
P Chao, X Zhang, L Zhang, A Yang, Y Wang… - Scientific Reports, 2024 - nature.com
Streptococcus gallolyticus is a non-motile, gram-positive bacterium that causes infective
endocarditis. S. gallolyticus has developed resistance to existing antibiotics, and no vaccine …
endocarditis. S. gallolyticus has developed resistance to existing antibiotics, and no vaccine …
Automated design of macrocycles for therapeutic applications: from small molecules to peptides and proteins
Macrocycles and cyclic peptides are increasingly attractive therapeutic modalities as they
often have improved affinity, are able to bind to extended protein surfaces, and otherwise …
often have improved affinity, are able to bind to extended protein surfaces, and otherwise …
Identification of potential human COX-2 inhibitors using computational modeling and molecular dynamics simulations
To explore the structure-property relationship in a set of molecules against Cyclooxygenase-
2 (COX-2), pharmacophore modeling, molecular docking and 3D-QSAR studies were …
2 (COX-2), pharmacophore modeling, molecular docking and 3D-QSAR studies were …
TIES 20: Relative binding free energy with a flexible superimposition algorithm and partial ring morphing
The TIES (Thermodynamic Integration with Enhanced Sampling) protocol is a formally exact
alchemical approach in computational chemistry to the calculation of relative binding free …
alchemical approach in computational chemistry to the calculation of relative binding free …