The integrin adhesome: from genes and proteins to human disease

SE Winograd-Katz, R Fässler, B Geiger… - … reviews Molecular cell …, 2014 - nature.com
The adhesive interactions of cells with their environment through the integrin family of
transmembrane receptors have key roles in regulating multiple aspects of cellular …

PATRIC: the comprehensive bacterial bioinformatics resource with a focus on human pathogenic species

JJ Gillespie, AR Wattam, SA Cammer… - Infection and …, 2011 - Am Soc Microbiol
ABSTRACT Funded by the National Institute of Allergy and Infectious Diseases, the Pat
hosystems R esource I ntegration C enter (PATRIC) is a genomics-centric relational …

Human ageing genomic resources: new and updated databases

R Tacutu, D Thornton, E Johnson… - Nucleic acids …, 2018 - academic.oup.com
In spite of a growing body of research and data, human ageing remains a poorly understood
process. Over 10 years ago we developed the Human Ageing Genomic Resources (HAGR) …

[HTML][HTML] Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits

S Ghosal, S Das, R Sen, P Basak… - Frontiers in genetics, 2013 - frontiersin.org
Circular RNAs are new players in regulation of post transcriptional gene expression. Animal
genomes express many circular RNAs from diverse genomic locations. A recent study has …

Temporal dynamics and genetic control of transcription in the human prefrontal cortex

C Colantuoni, BK Lipska, T Ye, TM Hyde, R Tao… - Nature, 2011 - nature.com
Previous investigations have combined transcriptional and genetic analyses in human cell
lines,,, but few have applied these techniques to human neural tissue,,,,. To gain a global …

Genome-wide association and large-scale follow up identifies 16 new loci influencing lung function

MS Artigas, DW Loth, LV Wain, SA Gharib, M Obeidat… - Nature …, 2011 - nature.com
Pulmonary function measures reflect respiratory health and are used in the diagnosis of
chronic obstructive pulmonary disease. We tested genome-wide association with forced …

[HTML][HTML] Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo

AD Ramos, A Diaz, A Nellore, RN Delgado, KY Park… - Cell stem cell, 2013 - cell.com
Long noncoding RNAs (lncRNAs) have been described in cell lines and various whole
tissues, but lncRNA analysis of development in vivo is limited. Here, we comprehensively …

[HTML][HTML] The human neuropsychiatric risk gene Drd2 is necessary for social functioning across evolutionary distant species

KGO Ike, SJC Lamers, S Kaim, SF de Boer… - Molecular …, 2024 - nature.com
The Drd2 gene, encoding the dopamine D 2 receptor (D2R), was recently indicated as a
potential target in the etiology of lowered sociability (ie, social withdrawal), a symptom of …

In silico prediction of physical protein interactions and characterization of interactome orphans

M Kotlyar, C Pastrello, F Pivetta, A Lo Sardo… - Nature …, 2015 - nature.com
Protein-protein interactions (PPIs) are useful for understanding signaling cascades,
predicting protein function, associating proteins with disease and fathoming drug …

[HTML][HTML] A comparison of human and mouse gene co-expression networks reveals conservation and divergence at the tissue, pathway and disease levels

G Monaco, S van Dam, JL Casal Novo Ribeiro… - BMC evolutionary …, 2015 - Springer
Background A deeper understanding of differences and similarities in transcriptional
regulation between species can uncover important information about gene functions and the …