[HTML][HTML] Emerging role of tumor-related functional peptides encoded by lncRNA and circRNA

P Wu, Y Mo, M Peng, T Tang, Y Zhong, X Deng… - Molecular cancer, 2020 - Springer
Non-coding RNAs do not encode proteins and regulate various oncological processes. They
are also important potential cancer diagnostic and prognostic biomarkers. Bioinformatics …

[HTML][HTML] Understanding Alzheimer disease at the interface between genetics and transcriptomics

J Verheijen, K Sleegers - Trends in Genetics, 2018 - cell.com
Over 25 genes are known to affect the risk of developing Alzheimer disease (AD), the most
common neurodegenerative dementia. However, mechanistic insights and improved …

The landscape of tolerated genetic variation in humans and primates

H Gao, T Hamp, J Ede, JG Schraiber, J McRae… - Science, 2023 - science.org
Personalized genome sequencing has revealed millions of genetic differences between
individuals, but our understanding of their clinical relevance remains largely incomplete. To …

The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019

A Buniello, JAL MacArthur, M Cerezo… - Nucleic acids …, 2019 - academic.oup.com
The GWAS Catalog delivers a high-quality curated collection of all published genome-wide
association studies enabling investigations to identify causal variants, understand disease …

The UCSC genome browser database: 2018 update

J Casper, AS Zweig, C Villarreal, C Tyner… - Nucleic acids …, 2018 - academic.oup.com
Abstract The UCSC Genome Browser (https://genome. ucsc. edu) provides a web interface
for exploring annotated genome assemblies. The assemblies and annotation tracks are …

[PDF][PDF] Alternative 3′ UTRs modify the localization, regulatory potential, stability, and plasticity of mRNAs in neuronal compartments

G Tushev, C Glock, M Heumüller, A Biever… - Neuron, 2018 - cell.com
Neurons localize mRNAs near synapses where their translation can be regulated by
synaptic demand and activity. Differences in the 3′ UTRs of mRNAs can change their …

The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease

A Noronha, J Modamio, Y Jarosz… - Nucleic acids …, 2019 - academic.oup.com
A multitude of factors contribute to complex diseases and can be measured with 'omics'
methods. Databases facilitate data interpretation for underlying mechanisms. Here, we …

[HTML][HTML] Evolution of neuronal cell classes and types in the vertebrate retina

J Hahn, A Monavarfeshani, M Qiao, AH Kao, Y Kölsch… - Nature, 2023 - nature.com
The basic plan of the retina is conserved across vertebrates, yet species differ profoundly in
their visual needs. Retinal cell types may have evolved to accommodate these varied needs …

A high-coverage Neandertal genome from Chagyrskaya Cave

F Mafessoni, S Grote, C De Filippo… - Proceedings of the …, 2020 - National Acad Sciences
We sequenced the genome of a Neandertal from Chagyrskaya Cave in the Altai Mountains,
Russia, to 27-fold genomic coverage. We show that this Neandertal was a female and that …

RMBase v2. 0: deciphering the map of RNA modifications from epitranscriptome sequencing data

JJ Xuan, WJ Sun, PH Lin, KR Zhou, S Liu… - Nucleic acids …, 2018 - academic.oup.com
More than 100 distinct chemical modifications to RNA have been characterized so far.
However, the prevalence, mechanisms and functions of various RNA modifications remain …