Geometric deep learning on molecular representations
Geometric deep learning (GDL) is based on neural network architectures that incorporate
and process symmetry information. GDL bears promise for molecular modelling applications …
and process symmetry information. GDL bears promise for molecular modelling applications …
[HTML][HTML] Structure-based drug design with geometric deep learning
Abstract Structure-based drug design uses three-dimensional geometric information of
macromolecules, such as proteins or nucleic acids, to identify suitable ligands. Geometric …
macromolecules, such as proteins or nucleic acids, to identify suitable ligands. Geometric …
Geometric deep learning for drug discovery
Drug discovery is a time-consuming and expensive process. With the development of
Artificial Intelligence (AI) techniques, molecular Geometric Deep Learning (GDL) has …
Artificial Intelligence (AI) techniques, molecular Geometric Deep Learning (GDL) has …
[HTML][HTML] Enhancing geometric representations for molecules with equivariant vector-scalar interactive message passing
Geometric deep learning has been revolutionizing the molecular modeling field. Despite the
state-of-the-art neural network models are approaching ab initio accuracy for molecular …
state-of-the-art neural network models are approaching ab initio accuracy for molecular …
A Hitchhiker's Guide to Geometric GNNs for 3D Atomic Systems
Recent advances in computational modelling of atomic systems, spanning molecules,
proteins, and materials, represent them as geometric graphs with atoms embedded as …
proteins, and materials, represent them as geometric graphs with atoms embedded as …
Symmetry-informed geometric representation for molecules, proteins, and crystalline materials
Artificial intelligence for scientific discovery has recently generated significant interest within
the machine learning and scientific communities, particularly in the domains of chemistry …
the machine learning and scientific communities, particularly in the domains of chemistry …
Geometric deep learning for structure-based ligand design
A pervasive challenge in drug design is determining how to expand a ligand─ a small
molecule that binds to a target biomolecule─ in order to improve various properties of the …
molecule that binds to a target biomolecule─ in order to improve various properties of the …
DG‐GL: Differential geometry‐based geometric learning of molecular datasets
Motivation: Despite its great success in various physical modeling, differential geometry
(DG) has rarely been devised as a versatile tool for analyzing large, diverse, and complex …
(DG) has rarely been devised as a versatile tool for analyzing large, diverse, and complex …
Enhanced Deep‐Learning Prediction of Molecular Properties via Augmentation of Bond Topology
H Cho, IS Choi - ChemMedChem, 2019 - Wiley Online Library
Deep learning has made great strides in tackling chemical problems, but still lacks full‐
fledged representations for three‐dimensional (3D) molecular structures for its inner …
fledged representations for three‐dimensional (3D) molecular structures for its inner …
A review of mathematical representations of biomolecular data
Recently, machine learning (ML) has established itself in various worldwide benchmarking
competitions in computational biology, including Critical Assessment of Structure Prediction …
competitions in computational biology, including Critical Assessment of Structure Prediction …