[图书][B] Periodicity measurement using cost-effective multirate DSP models of discrete Fourier and trigonometric transforms
A Rushdi - 2008 - search.proquest.com
The detection of different forms of periodicities in symbolic sequences and specifically in
DNA sequences has been an active area of research in recent years. Hidden periodicity …
DNA sequences has been an active area of research in recent years. Hidden periodicity …
A DSP approach for finding the codon bias in DNA sequences
J Tuqan, A Rushdi - IEEE Journal of Selected Topics in Signal …, 2008 - ieeexplore.ieee.org
The detection of different forms of periodicities in DNA sequences has been an active area
of research in recent years. Most of the signal processing based methods have primarily …
of research in recent years. Most of the signal processing based methods have primarily …
Trigonometric transforms for finding repeats in DNA sequences
A Rushdi, J Tuqan - 2008 IEEE International Workshop on …, 2008 - ieeexplore.ieee.org
The detection of many forms of periodicities in DNA sequences has been an active area of
research in recent years. Most of the signal processing based methods have primarily …
research in recent years. Most of the signal processing based methods have primarily …
[HTML][HTML] Map-invariant spectral analysis for the identification of DNA periodicities
A Rushdi, J Tuqan, T Strohmer - EURASIP Journal on Bioinformatics and …, 2012 - Springer
Many signal processing based methods for finding hidden periodicities in DNA sequences
have primarily focused on assigning numerical values to the symbolic DNA sequence and …
have primarily focused on assigning numerical values to the symbolic DNA sequence and …
An integer period DFT for biological sequence processing
Detection of periodicity in symbolic sequences such as DNA is of considerable interest in a
number of applications, however fast, accurate algorithms are needed for measuring …
number of applications, however fast, accurate algorithms are needed for measuring …
Detection of periodic signals in DNA and protein sequences
Y Song - 2013 - lbms03.cityu.edu.hk
Proteins play critical roles in life. Protein coding genes in eukaryotes can be long and are
usually" split" into discrete DNA segments called introns and exons. Exons will be spliced …
usually" split" into discrete DNA segments called introns and exons. Exons will be spliced …
Fast approximate computation of non-uniform DFTs for biological sequence analysis
J Epps - Electronics letters, 2009 - IET
Periodicity is emerging as a useful method for characterising the structure within biological
sequences such as DNA. For sequence data, integer periods are usually of most interest …
sequences such as DNA. For sequence data, integer periods are usually of most interest …
Prediction of protein coding regions in DNA sequences using signal processing methods
Identification of protein-coding regions in Deoxyribonucleic Acid (DNA) sequences because
of their 3-base periodicity has been a challenging issue in bioinformatics. Many DSP (Digital …
of their 3-base periodicity has been a challenging issue in bioinformatics. Many DSP (Digital …
The filtered spectral rotation measure
A Rushdi, J Tuqan - 2006 Fortieth Asilomar Conference on …, 2006 - ieeexplore.ieee.org
Many signal processing techniques were proposed in the past to identify the so-called
period-3 component in the protein coding regions of DNA sequences. Most of these …
period-3 component in the protein coding regions of DNA sequences. Most of these …
An adaptive window length strategy for eukaryotic CDS prediction
Signal processing-based algorithms for identification of coding sequences (CDS) in
eukaryotes are non-data driven and exploit the presence of three-base periodicity in these …
eukaryotes are non-data driven and exploit the presence of three-base periodicity in these …