The synthesizability of molecules proposed by generative models
The discovery of functional molecules is an expensive and time-consuming process,
exemplified by the rising costs of small molecule therapeutic discovery. One class of …
exemplified by the rising costs of small molecule therapeutic discovery. One class of …
Deep Generative Models in De Novo Drug Molecule Generation
The discovery of new drugs has important implications for human health. Traditional
methods for drug discovery rely on experiments to optimize the structure of lead molecules …
methods for drug discovery rely on experiments to optimize the structure of lead molecules …
[HTML][HTML] On failure modes in molecule generation and optimization
There has been a wave of generative models for molecules triggered by advances in the
field of Deep Learning. These generative models are often used to optimize chemical …
field of Deep Learning. These generative models are often used to optimize chemical …
Deep learning for molecular generation
Y Xu, K Lin, S Wang, L Wang, C Cai… - Future medicinal …, 2019 - Taylor & Francis
De novo drug design aims to generate novel chemical compounds with desirable chemical
and pharmacological properties from scratch using computer-based methods. Recently …
and pharmacological properties from scratch using computer-based methods. Recently …
Generative models for molecular discovery: Recent advances and challenges
Abstract Development of new products often relies on the discovery of novel molecules.
While conventional molecular design involves using human expertise to propose …
While conventional molecular design involves using human expertise to propose …
Retrieval-based controllable molecule generation
Generating new molecules with specified chemical and biological properties via generative
models has emerged as a promising direction for drug discovery. However, existing …
models has emerged as a promising direction for drug discovery. However, existing …
Molecular sets (MOSES): a benchmarking platform for molecular generation models
D Polykovskiy, A Zhebrak… - Frontiers in …, 2020 - frontiersin.org
Generative models are becoming a tool of choice for exploring the molecular space. These
models learn on a large training dataset and produce novel molecular structures with similar …
models learn on a large training dataset and produce novel molecular structures with similar …
Generative molecular design in low data regimes
Generative machine learning models sample molecules from chemical space without the
need for explicit design rules. To enable the generative design of innovative molecular …
need for explicit design rules. To enable the generative design of innovative molecular …
Generative models should at least be able to design molecules that dock well: A new benchmark
T Cieplinski, T Danel, S Podlewska… - Journal of Chemical …, 2023 - ACS Publications
Designing compounds with desired properties is a key element of the drug discovery
process. However, measuring progress in the field has been challenging due to the lack of …
process. However, measuring progress in the field has been challenging due to the lack of …
RetroGNN: fast estimation of synthesizability for virtual screening and de novo design by learning from slow retrosynthesis software
De novo molecule design algorithms often result in chemically unfeasible or synthetically
inaccessible molecules. A natural idea to mitigate this problem is to bias these algorithms …
inaccessible molecules. A natural idea to mitigate this problem is to bias these algorithms …