[HTML][HTML] CSatDTA: prediction of drug–target binding affinity using convolution model with self-attention

A Ghimire, H Tayara, Z Xuan, KT Chong - International journal of …, 2022 - mdpi.com
Drug discovery, which aids to identify potential novel treatments, entails a broad range of
fields of science, including chemistry, pharmacology, and biology. In the early stages of drug …

Associative learning mechanism for drug‐target interaction prediction

Z Zhu, Z Yao, G Qi, N Mazur, P Yang… - CAAI Transactions on …, 2023 - Wiley Online Library
As a necessary process of modern drug development, finding a drug compound that can
selectively bind to a specific protein is highly challenging and costly. Exploring drug‐target …

AttentionDTA: Drug–target binding affinity prediction by sequence-based deep learning with attention mechanism

Q Zhao, G Duan, M Yang, Z Cheng… - … /ACM transactions on …, 2022 - ieeexplore.ieee.org
The identification of drug–target relations (DTRs) is substantial in drug development. A large
number of methods treat DTRs as drug-target interactions (DTIs), a binary classification …

MFR-DTA: a multi-functional and robust model for predicting drug–target binding affinity and region

Y Hua, X Song, Z Feng, X Wu - Bioinformatics, 2023 - academic.oup.com
Motivation Recently, deep learning has become the mainstream methodology for drug–
target binding affinity prediction. However, two deficiencies of the existing methods restrict …

[HTML][HTML] Predicting drug-target interactions from drug structure and protein sequence using novel convolutional neural networks

SS Hu, C Zhang, P Chen, P Gu, J Zhang, B Wang - BMC bioinformatics, 2019 - Springer
Background Accurate identification of potential interactions between drugs and protein
targets is a critical step to accelerate drug discovery. Despite many relative experimental …

[HTML][HTML] A deep learning method for drug-target affinity prediction based on sequence interaction information mining

M Jiang, Y Shao, Y Zhang, W Zhou, S Pang - PeerJ, 2023 - peerj.com
Background A critical aspect of in silico drug discovery involves the prediction of drug-target
affinity (DTA). Conducting wet lab experiments to determine affinity is both expensive and …

[HTML][HTML] DeepMHADTA: prediction of drug-target binding affinity using multi-head self-attention and convolutional neural network

L Deng, Y Zeng, H Liu, Z Liu, X Liu - Current Issues in Molecular Biology, 2022 - mdpi.com
Drug-target interactions provide insight into the drug-side effects and drug repositioning.
However, wet-lab biochemical experiments are time-consuming and labor-intensive, and …

[HTML][HTML] Graph–sequence attention and transformer for predicting drug–target affinity

X Yan, Y Liu - RSC advances, 2022 - pubs.rsc.org
Drug–target binding affinity (DTA) prediction has drawn increasing interest due to its
substantial position in the drug discovery process. The development of new drugs is costly …

GSAML-DTA: an interpretable drug-target binding affinity prediction model based on graph neural networks with self-attention mechanism and mutual information

J Liao, H Chen, L Wei, L Wei - Computers in biology and medicine, 2022 - Elsevier
Identifying drug-target affinity (DTA) has great practical importance in the process of
designing efficacious drugs for known diseases. Recently, numerous deep learning-based …

Fusion-based deep learning architecture for detecting drug-target binding affinity using target and drug sequence and structure

K Wang, M Li - IEEE Journal of Biomedical and Health …, 2023 - ieeexplore.ieee.org
Accurately predicting drug-target binding affinity plays a vital role in accelerating drug
discovery. Many computational approaches have been proposed due to costly and time …