'Conserved hypothetical'proteins: prioritization of targets for experimental study

MY Galperin, EV Koonin - Nucleic acids research, 2004 - academic.oup.com
Comparative genomics shows that a substantial fraction of the genes in sequenced
genomes encodes 'conserved hypothetical'proteins, ie those that are found in organisms …

Biotechnology and molecular biology of the α-glucosidase inhibitor acarbose

UF Wehmeier, W Piepersberg - Applied microbiology and biotechnology, 2004 - Springer
The α-glucosidase inhibitor acarbose, O-{4, 6-dideoxy-4 [1 s-(1, 4, 6/5)-4, 5, 6-trihydroxy-3-
hydroxymethyl-2-cyclohexen-1-yl]-amino-α-d-glucopyranosyl}-(1→ 4)-O-α-d-glucopyranosyl …

Fat mobilization in adipose tissue is promoted by adipose triglyceride lipase

R Zimmermann, JG Strauss, G Haemmerle… - Science, 2004 - science.org
Mobilization of fatty acids from triglyceride stores in adipose tissue requires lipolytic
enzymes. Dysfunctional lipolysis affects energy homeostasis and may contribute to the …

[HTML][HTML] A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes

EV Koonin, ND Fedorova, JD Jackson, AR Jacobs… - Genome biology, 2004 - Springer
Background Sequencing the genomes of multiple, taxonomically diverse eukaryotes
enables in-depth comparative-genomic analysis which is expected to help in reconstructing …

[HTML][HTML] A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land

FU Battistuzzi, A Feijao, SB Hedges - BMC evolutionary biology, 2004 - Springer
Background The timescale of prokaryote evolution has been difficult to reconstruct because
of a limited fossil record and complexities associated with molecular clocks and deep …

Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain

R Paul, S Weiser, NC Amiot, C Chan… - Genes & …, 2004 - genesdev.cshlp.org
Pole development is coordinated with the Caulobacter crescentus cell cycle by two-
component signaling proteins. We show that an unusual response regulator, PleD, is …

New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

JE Barrick, KA Corbino, WC Winkler… - Proceedings of the …, 2004 - National Acad Sciences
The expression of certain genes involved in fundamental metabolism is regulated by
metabolite-binding “riboswitch” elements embedded within their corresponding mRNAs. We …

Sequence and comparative analysis of the maize NB mitochondrial genome

SW Clifton, P Minx, CMR Fauron, M Gibson… - Plant …, 2004 - academic.oup.com
The NB mitochondrial genome found in most fertile varieties of commercial maize (Zea mays
subsp. mays) was sequenced. The 569,630-bp genome maps as a circle containing 58 …

Introns and splicing elements of five diverse fungi

DM Kupfer, SD Drabenstot, KL Buchanan, H Lai… - Eukaryotic …, 2004 - Am Soc Microbiol
Genomic sequences and expressed sequence tag data for a diverse group of fungi
(Saccharomyces cerevisiae, Schizosaccharomyces pombe, Aspergillus nidulans …

[HTML][HTML] VisANT: an online visualization and analysis tool for biological interaction data

Z Hu, J Mellor, J Wu, C DeLisi - BMC bioinformatics, 2004 - Springer
Background New techniques for determining relationships between biomolecules of all
types–genes, proteins, noncoding DNA, metabolites and small molecules–are now making …